Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
AP3S1Q92572 FP700111.2-201ENST00000619190 1892 ntBASIC18.16■□□□□ 0.5
AP3S1Q92572 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.16■□□□□ 0.5
AP3S1Q92572 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
AP3S1Q92572 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
AP3S1Q92572 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
AP3S1Q92572 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
AP3S1Q92572 CLTA-206ENST00000466396 695 ntTSL 2 BASIC18.16■□□□□ 0.5
AP3S1Q92572 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC18.16■□□□□ 0.5
AP3S1Q92572 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
AP3S1Q92572 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC18.16■□□□□ 0.5
AP3S1Q92572 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
AP3S1Q92572 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
AP3S1Q92572 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
AP3S1Q92572 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
AP3S1Q92572 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
AP3S1Q92572 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
AP3S1Q92572 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
AP3S1Q92572 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.16■□□□□ 0.5
AP3S1Q92572 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.15■□□□□ 0.5
AP3S1Q92572 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.15■□□□□ 0.5
AP3S1Q92572 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.15■□□□□ 0.5
AP3S1Q92572 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
AP3S1Q92572 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
AP3S1Q92572 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.15■□□□□ 0.5
AP3S1Q92572 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
AP3S1Q92572 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
AP3S1Q92572 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
AP3S1Q92572 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC18.15■□□□□ 0.5
AP3S1Q92572 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
AP3S1Q92572 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
AP3S1Q92572 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
AP3S1Q92572 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
AP3S1Q92572 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
AP3S1Q92572 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
AP3S1Q92572 AC090340.1-201ENST00000620778 4980 ntBASIC18.15■□□□□ 0.5
AP3S1Q92572 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
AP3S1Q92572 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
AP3S1Q92572 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
AP3S1Q92572 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.15■□□□□ 0.5
AP3S1Q92572 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
AP3S1Q92572 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
AP3S1Q92572 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
AP3S1Q92572 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
AP3S1Q92572 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.14■□□□□ 0.5
AP3S1Q92572 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
AP3S1Q92572 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
AP3S1Q92572 AC133637.1-201ENST00000624115 1537 ntBASIC18.14■□□□□ 0.49
AP3S1Q92572 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC18.14■□□□□ 0.49
AP3S1Q92572 Z92544.1-202ENST00000571933 1220 ntBASIC18.14■□□□□ 0.49
AP3S1Q92572 TNXA-203ENST00000507684 2038 ntBASIC18.14■□□□□ 0.49
AP3S1Q92572 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
AP3S1Q92572 AP004607.7-201ENST00000527152 1677 ntBASIC18.14■□□□□ 0.49
AP3S1Q92572 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
AP3S1Q92572 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
AP3S1Q92572 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.14■□□□□ 0.49
AP3S1Q92572 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
AP3S1Q92572 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.14■□□□□ 0.49
AP3S1Q92572 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.14■□□□□ 0.49
AP3S1Q92572 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
AP3S1Q92572 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
AP3S1Q92572 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
AP3S1Q92572 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
AP3S1Q92572 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
AP3S1Q92572 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
AP3S1Q92572 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
AP3S1Q92572 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
AP3S1Q92572 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
AP3S1Q92572 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
AP3S1Q92572 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
AP3S1Q92572 BEX3-202ENST00000372634 753 ntTSL 2 BASIC18.13■□□□□ 0.49
AP3S1Q92572 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC18.13■□□□□ 0.49
AP3S1Q92572 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.13■□□□□ 0.49
AP3S1Q92572 AP000974.1-201ENST00000623909 2387 ntBASIC18.13■□□□□ 0.49
AP3S1Q92572 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC18.13■□□□□ 0.49
AP3S1Q92572 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
AP3S1Q92572 TCF3P1-201ENST00000423021 1937 ntBASIC18.13■□□□□ 0.49
AP3S1Q92572 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.13■□□□□ 0.49
AP3S1Q92572 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
AP3S1Q92572 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
AP3S1Q92572 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
AP3S1Q92572 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
AP3S1Q92572 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.12■□□□□ 0.49
AP3S1Q92572 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.12■□□□□ 0.49
AP3S1Q92572 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
AP3S1Q92572 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.12■□□□□ 0.49
AP3S1Q92572 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
AP3S1Q92572 AC010141.3-201ENST00000456659 717 ntBASIC18.12■□□□□ 0.49
AP3S1Q92572 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
AP3S1Q92572 AL451085.2-201ENST00000605085 799 ntBASIC18.12■□□□□ 0.49
AP3S1Q92572 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
AP3S1Q92572 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
AP3S1Q92572 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
AP3S1Q92572 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
AP3S1Q92572 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
AP3S1Q92572 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
AP3S1Q92572 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
AP3S1Q92572 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
AP3S1Q92572 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.12■□□□□ 0.49
AP3S1Q92572 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms