Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.42■□□□□ 0.7
TM9SF4Q92544 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TM9SF4Q92544 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.42■□□□□ 0.7
TM9SF4Q92544 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.42■□□□□ 0.7
TM9SF4Q92544 AL162412.1-201ENST00000567129 965 ntBASIC19.42■□□□□ 0.7
TM9SF4Q92544 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
TM9SF4Q92544 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
TM9SF4Q92544 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TM9SF4Q92544 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TM9SF4Q92544 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TM9SF4Q92544 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.42■□□□□ 0.7
TM9SF4Q92544 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
TM9SF4Q92544 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TM9SF4Q92544 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TM9SF4Q92544 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TM9SF4Q92544 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TM9SF4Q92544 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TM9SF4Q92544 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TM9SF4Q92544 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.41■□□□□ 0.7
TM9SF4Q92544 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TM9SF4Q92544 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.41■□□□□ 0.7
TM9SF4Q92544 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.41■□□□□ 0.7
TM9SF4Q92544 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.41■□□□□ 0.7
TM9SF4Q92544 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.41■□□□□ 0.7
TM9SF4Q92544 RNA5SP413-201ENST00000516373 109 ntBASIC19.41■□□□□ 0.7
TM9SF4Q92544 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TM9SF4Q92544 MIR4651-201ENST00000582622 73 ntBASIC19.41■□□□□ 0.7
TM9SF4Q92544 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TM9SF4Q92544 AC066615.1-201ENST00000640911 628 ntBASIC19.41■□□□□ 0.7
TM9SF4Q92544 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.41■□□□□ 0.7
TM9SF4Q92544 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.41■□□□□ 0.7
TM9SF4Q92544 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TM9SF4Q92544 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TM9SF4Q92544 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
TM9SF4Q92544 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
TM9SF4Q92544 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.4■□□□□ 0.7
TM9SF4Q92544 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TM9SF4Q92544 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TM9SF4Q92544 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
TM9SF4Q92544 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TM9SF4Q92544 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TM9SF4Q92544 POU5F1P3-201ENST00000428824 1078 ntBASIC19.4■□□□□ 0.7
TM9SF4Q92544 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
TM9SF4Q92544 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.4■□□□□ 0.7
TM9SF4Q92544 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.4■□□□□ 0.7
TM9SF4Q92544 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
TM9SF4Q92544 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
TM9SF4Q92544 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TM9SF4Q92544 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TM9SF4Q92544 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TM9SF4Q92544 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TM9SF4Q92544 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
TM9SF4Q92544 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
TM9SF4Q92544 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
TM9SF4Q92544 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.39■□□□□ 0.69
TM9SF4Q92544 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TM9SF4Q92544 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.39■□□□□ 0.69
TM9SF4Q92544 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
TM9SF4Q92544 KRT18P29-201ENST00000397031 1267 ntBASIC19.39■□□□□ 0.69
TM9SF4Q92544 AL591742.1-201ENST00000604433 565 ntBASIC19.39■□□□□ 0.69
TM9SF4Q92544 AC016405.3-201ENST00000607710 860 ntBASIC19.39■□□□□ 0.69
TM9SF4Q92544 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
TM9SF4Q92544 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.39■□□□□ 0.69
TM9SF4Q92544 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.39■□□□□ 0.69
TM9SF4Q92544 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TM9SF4Q92544 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.39■□□□□ 0.69
TM9SF4Q92544 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TM9SF4Q92544 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.39■□□□□ 0.69
TM9SF4Q92544 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.39■□□□□ 0.69
TM9SF4Q92544 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TM9SF4Q92544 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TM9SF4Q92544 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TM9SF4Q92544 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TM9SF4Q92544 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TM9SF4Q92544 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TM9SF4Q92544 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TM9SF4Q92544 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TM9SF4Q92544 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TM9SF4Q92544 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.38■□□□□ 0.69
TM9SF4Q92544 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
TM9SF4Q92544 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.38■□□□□ 0.69
TM9SF4Q92544 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.38■□□□□ 0.69
TM9SF4Q92544 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
TM9SF4Q92544 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.38■□□□□ 0.69
TM9SF4Q92544 AC098934.4-201ENST00000564127 592 ntBASIC19.38■□□□□ 0.69
TM9SF4Q92544 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.38■□□□□ 0.69
TM9SF4Q92544 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.38■□□□□ 0.69
TM9SF4Q92544 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TM9SF4Q92544 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TM9SF4Q92544 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TM9SF4Q92544 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TM9SF4Q92544 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TM9SF4Q92544 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TM9SF4Q92544 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TM9SF4Q92544 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TM9SF4Q92544 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TM9SF4Q92544 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TM9SF4Q92544 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TM9SF4Q92544 AF106564.1-201ENST00000607058 2553 ntBASIC19.37■□□□□ 0.69
TM9SF4Q92544 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms