Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTN4IP1Q8WWV3 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTN4IP1Q8WWV3 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTN4IP1Q8WWV3 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTN4IP1Q8WWV3 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.32■□□□□ 0.36
RTN4IP1Q8WWV3 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTN4IP1Q8WWV3 BX005040.4-201ENST00000637145 1518 ntBASIC17.31■□□□□ 0.36
RTN4IP1Q8WWV3 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC17.31■□□□□ 0.36
RTN4IP1Q8WWV3 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RTN4IP1Q8WWV3 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTN4IP1Q8WWV3 IRS3P-201ENST00000223076 1006 ntBASIC17.31■□□□□ 0.36
RTN4IP1Q8WWV3 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
RTN4IP1Q8WWV3 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTN4IP1Q8WWV3 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
RTN4IP1Q8WWV3 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC17.31■□□□□ 0.36
RTN4IP1Q8WWV3 AL358852.1-201ENST00000623174 1268 ntBASIC17.31■□□□□ 0.36
RTN4IP1Q8WWV3 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTN4IP1Q8WWV3 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC17.31■□□□□ 0.36
RTN4IP1Q8WWV3 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
RTN4IP1Q8WWV3 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTN4IP1Q8WWV3 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
RTN4IP1Q8WWV3 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
RTN4IP1Q8WWV3 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTN4IP1Q8WWV3 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTN4IP1Q8WWV3 NARF-205ENST00000412079 1760 ntTSL 5 BASIC17.3■□□□□ 0.36
RTN4IP1Q8WWV3 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
RTN4IP1Q8WWV3 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
RTN4IP1Q8WWV3 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTN4IP1Q8WWV3 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTN4IP1Q8WWV3 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
RTN4IP1Q8WWV3 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
RTN4IP1Q8WWV3 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTN4IP1Q8WWV3 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTN4IP1Q8WWV3 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTN4IP1Q8WWV3 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTN4IP1Q8WWV3 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
RTN4IP1Q8WWV3 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTN4IP1Q8WWV3 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTN4IP1Q8WWV3 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RTN4IP1Q8WWV3 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
RTN4IP1Q8WWV3 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
RTN4IP1Q8WWV3 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
RTN4IP1Q8WWV3 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC17.3■□□□□ 0.36
RTN4IP1Q8WWV3 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTN4IP1Q8WWV3 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTN4IP1Q8WWV3 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTN4IP1Q8WWV3 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
RTN4IP1Q8WWV3 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTN4IP1Q8WWV3 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.3■□□□□ 0.36
RTN4IP1Q8WWV3 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
RTN4IP1Q8WWV3 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
RTN4IP1Q8WWV3 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.29■□□□□ 0.36
RTN4IP1Q8WWV3 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RTN4IP1Q8WWV3 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RTN4IP1Q8WWV3 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
RTN4IP1Q8WWV3 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
RTN4IP1Q8WWV3 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RTN4IP1Q8WWV3 NME4-202ENST00000382940 766 ntTSL 3 BASIC17.29■□□□□ 0.36
RTN4IP1Q8WWV3 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC17.29■□□□□ 0.36
RTN4IP1Q8WWV3 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RTN4IP1Q8WWV3 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC17.29■□□□□ 0.36
RTN4IP1Q8WWV3 NME4-211ENST00000620944 1193 ntTSL 2 BASIC17.29■□□□□ 0.36
RTN4IP1Q8WWV3 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC17.29■□□□□ 0.36
RTN4IP1Q8WWV3 PXK-203ENST00000383715 1756 ntTSL 5 BASIC17.29■□□□□ 0.36
RTN4IP1Q8WWV3 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RTN4IP1Q8WWV3 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RTN4IP1Q8WWV3 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RTN4IP1Q8WWV3 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.29■□□□□ 0.36
RTN4IP1Q8WWV3 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.29■□□□□ 0.36
RTN4IP1Q8WWV3 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC17.29■□□□□ 0.36
RTN4IP1Q8WWV3 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RTN4IP1Q8WWV3 AFG3L1P-217ENST00000557444 2447 ntBASIC17.29■□□□□ 0.36
RTN4IP1Q8WWV3 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RTN4IP1Q8WWV3 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RTN4IP1Q8WWV3 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RTN4IP1Q8WWV3 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RTN4IP1Q8WWV3 STX5-203ENST00000394690 1568 ntTSL 5 BASIC17.28■□□□□ 0.36
RTN4IP1Q8WWV3 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.28■□□□□ 0.36
RTN4IP1Q8WWV3 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.28■□□□□ 0.36
RTN4IP1Q8WWV3 AC027702.1-201ENST00000563810 1770 ntBASIC17.28■□□□□ 0.36
RTN4IP1Q8WWV3 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.28■□□□□ 0.36
RTN4IP1Q8WWV3 AC121338.2-201ENST00000622535 1744 ntBASIC17.28■□□□□ 0.36
RTN4IP1Q8WWV3 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RTN4IP1Q8WWV3 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RTN4IP1Q8WWV3 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC17.28■□□□□ 0.36
RTN4IP1Q8WWV3 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC17.28■□□□□ 0.36
RTN4IP1Q8WWV3 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RTN4IP1Q8WWV3 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RTN4IP1Q8WWV3 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
RTN4IP1Q8WWV3 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RTN4IP1Q8WWV3 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RTN4IP1Q8WWV3 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
RTN4IP1Q8WWV3 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RTN4IP1Q8WWV3 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC17.28■□□□□ 0.36
RTN4IP1Q8WWV3 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RTN4IP1Q8WWV3 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.27■□□□□ 0.36
RTN4IP1Q8WWV3 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
RTN4IP1Q8WWV3 AC005224.4-201ENST00000583262 1652 ntBASIC17.27■□□□□ 0.36
RTN4IP1Q8WWV3 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC17.27■□□□□ 0.36
RTN4IP1Q8WWV3 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms