Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RFWD2Q8NHY2 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RFWD2Q8NHY2 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.34■□□□□ 0.85
RFWD2Q8NHY2 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RFWD2Q8NHY2 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.34■□□□□ 0.85
RFWD2Q8NHY2 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
RFWD2Q8NHY2 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.34■□□□□ 0.85
RFWD2Q8NHY2 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RFWD2Q8NHY2 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RFWD2Q8NHY2 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RFWD2Q8NHY2 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RFWD2Q8NHY2 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RFWD2Q8NHY2 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
RFWD2Q8NHY2 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RFWD2Q8NHY2 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
RFWD2Q8NHY2 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.33■□□□□ 0.85
RFWD2Q8NHY2 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.33■□□□□ 0.85
RFWD2Q8NHY2 AC116562.4-201ENST00000641316 2276 ntBASIC20.33■□□□□ 0.85
RFWD2Q8NHY2 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
RFWD2Q8NHY2 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RFWD2Q8NHY2 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RFWD2Q8NHY2 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.33■□□□□ 0.85
RFWD2Q8NHY2 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.33■□□□□ 0.85
RFWD2Q8NHY2 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.33■□□□□ 0.85
RFWD2Q8NHY2 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.33■□□□□ 0.85
RFWD2Q8NHY2 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.33■□□□□ 0.85
RFWD2Q8NHY2 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RFWD2Q8NHY2 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
RFWD2Q8NHY2 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
RFWD2Q8NHY2 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
RFWD2Q8NHY2 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.33■□□□□ 0.84
RFWD2Q8NHY2 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RFWD2Q8NHY2 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RFWD2Q8NHY2 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.33■□□□□ 0.84
RFWD2Q8NHY2 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.33■□□□□ 0.84
RFWD2Q8NHY2 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RFWD2Q8NHY2 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.32■□□□□ 0.84
RFWD2Q8NHY2 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RFWD2Q8NHY2 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.32■□□□□ 0.84
RFWD2Q8NHY2 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.32■□□□□ 0.84
RFWD2Q8NHY2 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.32■□□□□ 0.84
RFWD2Q8NHY2 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.32■□□□□ 0.84
RFWD2Q8NHY2 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.32■□□□□ 0.84
RFWD2Q8NHY2 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RFWD2Q8NHY2 SRD5A1P1-201ENST00000442297 786 ntBASIC20.32■□□□□ 0.84
RFWD2Q8NHY2 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.32■□□□□ 0.84
RFWD2Q8NHY2 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RFWD2Q8NHY2 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RFWD2Q8NHY2 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RFWD2Q8NHY2 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.32■□□□□ 0.84
RFWD2Q8NHY2 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RFWD2Q8NHY2 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.32■□□□□ 0.84
RFWD2Q8NHY2 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.32■□□□□ 0.84
RFWD2Q8NHY2 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.31■□□□□ 0.84
RFWD2Q8NHY2 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.31■□□□□ 0.84
RFWD2Q8NHY2 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
RFWD2Q8NHY2 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.31■□□□□ 0.84
RFWD2Q8NHY2 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
RFWD2Q8NHY2 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
RFWD2Q8NHY2 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RFWD2Q8NHY2 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
RFWD2Q8NHY2 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.31■□□□□ 0.84
RFWD2Q8NHY2 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
RFWD2Q8NHY2 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
RFWD2Q8NHY2 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
RFWD2Q8NHY2 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.31■□□□□ 0.84
RFWD2Q8NHY2 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RFWD2Q8NHY2 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.31■□□□□ 0.84
RFWD2Q8NHY2 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RFWD2Q8NHY2 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.31■□□□□ 0.84
RFWD2Q8NHY2 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
RFWD2Q8NHY2 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RFWD2Q8NHY2 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
RFWD2Q8NHY2 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RFWD2Q8NHY2 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RFWD2Q8NHY2 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.31■□□□□ 0.84
RFWD2Q8NHY2 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RFWD2Q8NHY2 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
RFWD2Q8NHY2 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RFWD2Q8NHY2 AC098818.2-201ENST00000564925 2320 ntBASIC20.3■□□□□ 0.84
RFWD2Q8NHY2 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RFWD2Q8NHY2 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RFWD2Q8NHY2 TCF3P1-201ENST00000423021 1937 ntBASIC20.3■□□□□ 0.84
RFWD2Q8NHY2 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RFWD2Q8NHY2 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
RFWD2Q8NHY2 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RFWD2Q8NHY2 AL512631.2-201ENST00000604634 923 ntBASIC20.3■□□□□ 0.84
RFWD2Q8NHY2 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RFWD2Q8NHY2 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RFWD2Q8NHY2 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RFWD2Q8NHY2 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.3■□□□□ 0.84
RFWD2Q8NHY2 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RFWD2Q8NHY2 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RFWD2Q8NHY2 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
RFWD2Q8NHY2 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RFWD2Q8NHY2 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RFWD2Q8NHY2 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
RFWD2Q8NHY2 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
RFWD2Q8NHY2 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RFWD2Q8NHY2 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms