Protein–RNA interactions for Protein: Q8NCN4

RNF169, E3 ubiquitin-protein ligase RNF169, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF169Q8NCN4 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC22.48■■□□□ 1.19
RNF169Q8NCN4 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RNF169Q8NCN4 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RNF169Q8NCN4 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
RNF169Q8NCN4 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RNF169Q8NCN4 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
RNF169Q8NCN4 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
RNF169Q8NCN4 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
RNF169Q8NCN4 KRT18P68-201ENST00000392293 1000 ntBASIC22.47■■□□□ 1.19
RNF169Q8NCN4 AL158047.1-201ENST00000445918 881 ntBASIC22.47■■□□□ 1.19
RNF169Q8NCN4 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
RNF169Q8NCN4 AC098590.1-201ENST00000468126 897 ntBASIC22.47■■□□□ 1.19
RNF169Q8NCN4 UNC93B5-201ENST00000530315 699 ntBASIC22.47■■□□□ 1.19
RNF169Q8NCN4 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC22.47■■□□□ 1.19
RNF169Q8NCN4 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC22.47■■□□□ 1.19
RNF169Q8NCN4 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
RNF169Q8NCN4 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC22.47■■□□□ 1.19
RNF169Q8NCN4 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
RNF169Q8NCN4 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC22.46■■□□□ 1.19
RNF169Q8NCN4 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RNF169Q8NCN4 ECEL1P1-201ENST00000373592 1742 ntBASIC22.46■■□□□ 1.19
RNF169Q8NCN4 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC22.46■■□□□ 1.19
RNF169Q8NCN4 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RNF169Q8NCN4 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
RNF169Q8NCN4 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC22.46■■□□□ 1.19
RNF169Q8NCN4 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC22.46■■□□□ 1.19
RNF169Q8NCN4 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC22.46■■□□□ 1.19
RNF169Q8NCN4 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
RNF169Q8NCN4 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
RNF169Q8NCN4 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
RNF169Q8NCN4 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
RNF169Q8NCN4 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
RNF169Q8NCN4 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RNF169Q8NCN4 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC22.46■■□□□ 1.19
RNF169Q8NCN4 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
RNF169Q8NCN4 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
RNF169Q8NCN4 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RNF169Q8NCN4 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC22.45■■□□□ 1.18
RNF169Q8NCN4 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
RNF169Q8NCN4 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
RNF169Q8NCN4 AC026366.1-201ENST00000488803 879 ntBASIC22.45■■□□□ 1.18
RNF169Q8NCN4 AP003097.1-201ENST00000530657 1135 ntBASIC22.45■■□□□ 1.18
RNF169Q8NCN4 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
RNF169Q8NCN4 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
RNF169Q8NCN4 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RNF169Q8NCN4 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
RNF169Q8NCN4 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RNF169Q8NCN4 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
RNF169Q8NCN4 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
RNF169Q8NCN4 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC22.44■■□□□ 1.18
RNF169Q8NCN4 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
RNF169Q8NCN4 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
RNF169Q8NCN4 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RNF169Q8NCN4 PKD1P6-201ENST00000343738 4769 ntBASIC22.44■■□□□ 1.18
RNF169Q8NCN4 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
RNF169Q8NCN4 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
RNF169Q8NCN4 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC22.44■■□□□ 1.18
RNF169Q8NCN4 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC22.44■■□□□ 1.18
RNF169Q8NCN4 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
RNF169Q8NCN4 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC22.44■■□□□ 1.18
RNF169Q8NCN4 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
RNF169Q8NCN4 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RNF169Q8NCN4 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RNF169Q8NCN4 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
RNF169Q8NCN4 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
RNF169Q8NCN4 GCK-205ENST00000437084 1385 ntTSL 5 BASIC22.43■■□□□ 1.18
RNF169Q8NCN4 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
RNF169Q8NCN4 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RNF169Q8NCN4 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RNF169Q8NCN4 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RNF169Q8NCN4 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RNF169Q8NCN4 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC22.43■■□□□ 1.18
RNF169Q8NCN4 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC22.43■■□□□ 1.18
RNF169Q8NCN4 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC22.43■■□□□ 1.18
RNF169Q8NCN4 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC22.43■■□□□ 1.18
RNF169Q8NCN4 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC22.43■■□□□ 1.18
RNF169Q8NCN4 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RNF169Q8NCN4 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RNF169Q8NCN4 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RNF169Q8NCN4 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RNF169Q8NCN4 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC22.43■■□□□ 1.18
RNF169Q8NCN4 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RNF169Q8NCN4 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC22.42■■□□□ 1.18
RNF169Q8NCN4 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC22.42■■□□□ 1.18
RNF169Q8NCN4 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RNF169Q8NCN4 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
RNF169Q8NCN4 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC22.42■■□□□ 1.18
RNF169Q8NCN4 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
RNF169Q8NCN4 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC22.42■■□□□ 1.18
RNF169Q8NCN4 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC22.42■■□□□ 1.18
RNF169Q8NCN4 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
RNF169Q8NCN4 MFF-205ENST00000354503 1085 ntTSL 2 BASIC22.42■■□□□ 1.18
RNF169Q8NCN4 SAPCD2P1-201ENST00000395413 1184 ntBASIC22.42■■□□□ 1.18
RNF169Q8NCN4 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
RNF169Q8NCN4 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
RNF169Q8NCN4 AC073648.6-201ENST00000641589 218 ntBASIC22.42■■□□□ 1.18
RNF169Q8NCN4 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
RNF169Q8NCN4 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC22.42■■□□□ 1.18
RNF169Q8NCN4 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RNF169Q8NCN4 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC22.41■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms