Protein–RNA interactions for Protein: Q8IY21

DDX60, Probable ATP-dependent RNA helicase DDX60, humanhuman

Known RBP Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60Q8IY21 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC25.67■■□□□ 1.7
DDX60Q8IY21 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC25.67■■□□□ 1.7
DDX60Q8IY21 HES2-205ENST00000487437 968 ntTSL 3 BASIC25.67■■□□□ 1.7
DDX60Q8IY21 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
DDX60Q8IY21 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC25.67■■□□□ 1.7
DDX60Q8IY21 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
DDX60Q8IY21 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC25.67■■□□□ 1.7
DDX60Q8IY21 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC25.67■■□□□ 1.7
DDX60Q8IY21 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
DDX60Q8IY21 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
DDX60Q8IY21 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
DDX60Q8IY21 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
DDX60Q8IY21 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
DDX60Q8IY21 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC25.67■■□□□ 1.7
DDX60Q8IY21 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC25.66■■□□□ 1.7
DDX60Q8IY21 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
DDX60Q8IY21 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
DDX60Q8IY21 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC25.66■■□□□ 1.7
DDX60Q8IY21 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC25.66■■□□□ 1.7
DDX60Q8IY21 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
DDX60Q8IY21 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
DDX60Q8IY21 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC25.66■■□□□ 1.7
DDX60Q8IY21 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
DDX60Q8IY21 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
DDX60Q8IY21 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
DDX60Q8IY21 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
DDX60Q8IY21 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
DDX60Q8IY21 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
DDX60Q8IY21 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
DDX60Q8IY21 AL596275.1-201ENST00000423464 877 ntBASIC25.66■■□□□ 1.7
DDX60Q8IY21 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC25.65■■□□□ 1.7
DDX60Q8IY21 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
DDX60Q8IY21 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
DDX60Q8IY21 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC25.65■■□□□ 1.7
DDX60Q8IY21 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC25.65■■□□□ 1.7
DDX60Q8IY21 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
DDX60Q8IY21 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
DDX60Q8IY21 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
DDX60Q8IY21 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
DDX60Q8IY21 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC25.65■■□□□ 1.7
DDX60Q8IY21 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
DDX60Q8IY21 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC25.65■■□□□ 1.7
DDX60Q8IY21 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
DDX60Q8IY21 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC25.65■■□□□ 1.7
DDX60Q8IY21 POM121L13P-201ENST00000422362 380 ntBASIC25.65■■□□□ 1.7
DDX60Q8IY21 LSR-203ENST00000360798 1963 ntTSL 2 BASIC25.65■■□□□ 1.7
DDX60Q8IY21 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
DDX60Q8IY21 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC25.65■■□□□ 1.7
DDX60Q8IY21 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
DDX60Q8IY21 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
DDX60Q8IY21 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
DDX60Q8IY21 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC25.64■■□□□ 1.7
DDX60Q8IY21 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC25.64■■□□□ 1.7
DDX60Q8IY21 OR2A1-AS1-207ENST00000486094 819 ntBASIC25.64■■□□□ 1.7
DDX60Q8IY21 C1QBPP2-201ENST00000528754 825 ntBASIC25.64■■□□□ 1.7
DDX60Q8IY21 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC25.64■■□□□ 1.69
DDX60Q8IY21 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
DDX60Q8IY21 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC25.64■■□□□ 1.69
DDX60Q8IY21 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC25.64■■□□□ 1.69
DDX60Q8IY21 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC25.64■■□□□ 1.69
DDX60Q8IY21 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
DDX60Q8IY21 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
DDX60Q8IY21 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
DDX60Q8IY21 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
DDX60Q8IY21 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
DDX60Q8IY21 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
DDX60Q8IY21 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC25.63■■□□□ 1.69
DDX60Q8IY21 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC25.63■■□□□ 1.69
DDX60Q8IY21 CRK-204ENST00000574295 1391 ntTSL 5 BASIC25.63■■□□□ 1.69
DDX60Q8IY21 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC25.63■■□□□ 1.69
DDX60Q8IY21 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
DDX60Q8IY21 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
DDX60Q8IY21 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
DDX60Q8IY21 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC25.63■■□□□ 1.69
DDX60Q8IY21 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
DDX60Q8IY21 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC25.63■■□□□ 1.69
DDX60Q8IY21 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC25.63■■□□□ 1.69
DDX60Q8IY21 FAM197Y4-202ENST00000622692 608 ntBASIC25.63■■□□□ 1.69
DDX60Q8IY21 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
DDX60Q8IY21 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
DDX60Q8IY21 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC25.62■■□□□ 1.69
DDX60Q8IY21 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
DDX60Q8IY21 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
DDX60Q8IY21 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC25.62■■□□□ 1.69
DDX60Q8IY21 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC25.62■■□□□ 1.69
DDX60Q8IY21 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC25.62■■□□□ 1.69
DDX60Q8IY21 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC25.62■■□□□ 1.69
DDX60Q8IY21 MME-217ENST00000616757 1315 ntTSL 5 BASIC25.62■■□□□ 1.69
DDX60Q8IY21 PEX7-202ENST00000367756 680 ntTSL 3 BASIC25.62■■□□□ 1.69
DDX60Q8IY21 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC25.62■■□□□ 1.69
DDX60Q8IY21 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC25.62■■□□□ 1.69
DDX60Q8IY21 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC25.62■■□□□ 1.69
DDX60Q8IY21 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
DDX60Q8IY21 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
DDX60Q8IY21 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC25.62■■□□□ 1.69
DDX60Q8IY21 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
DDX60Q8IY21 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
DDX60Q8IY21 RPPH1-201ENST00000516869 333 ntBASIC25.61■■□□□ 1.69
DDX60Q8IY21 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
DDX60Q8IY21 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC25.61■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms