Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC23.05■■□□□ 1.28
TRIM50Q86XT4 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TRIM50Q86XT4 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
TRIM50Q86XT4 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TRIM50Q86XT4 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
TRIM50Q86XT4 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
TRIM50Q86XT4 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
TRIM50Q86XT4 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC23.05■■□□□ 1.28
TRIM50Q86XT4 UNC93B5-201ENST00000530315 699 ntBASIC23.05■■□□□ 1.28
TRIM50Q86XT4 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
TRIM50Q86XT4 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC23.05■■□□□ 1.28
TRIM50Q86XT4 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TRIM50Q86XT4 AC006058.3-201ENST00000606217 1069 ntBASIC23.05■■□□□ 1.28
TRIM50Q86XT4 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TRIM50Q86XT4 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC23.05■■□□□ 1.28
TRIM50Q86XT4 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
TRIM50Q86XT4 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TRIM50Q86XT4 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC23.05■■□□□ 1.28
TRIM50Q86XT4 DYM-203ENST00000442713 2147 ntTSL 2 BASIC23.05■■□□□ 1.28
TRIM50Q86XT4 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC23.05■■□□□ 1.28
TRIM50Q86XT4 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
TRIM50Q86XT4 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC23.04■■□□□ 1.28
TRIM50Q86XT4 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
TRIM50Q86XT4 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
TRIM50Q86XT4 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TRIM50Q86XT4 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
TRIM50Q86XT4 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TRIM50Q86XT4 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC23.04■■□□□ 1.28
TRIM50Q86XT4 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
TRIM50Q86XT4 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
TRIM50Q86XT4 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
TRIM50Q86XT4 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC23.04■■□□□ 1.28
TRIM50Q86XT4 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
TRIM50Q86XT4 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TRIM50Q86XT4 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
TRIM50Q86XT4 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TRIM50Q86XT4 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
TRIM50Q86XT4 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TRIM50Q86XT4 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TRIM50Q86XT4 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC23.03■■□□□ 1.28
TRIM50Q86XT4 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TRIM50Q86XT4 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
TRIM50Q86XT4 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC23.03■■□□□ 1.28
TRIM50Q86XT4 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TRIM50Q86XT4 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TRIM50Q86XT4 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC23.03■■□□□ 1.28
TRIM50Q86XT4 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC23.03■■□□□ 1.28
TRIM50Q86XT4 RPS2P52-201ENST00000469610 820 ntBASIC23.03■■□□□ 1.28
TRIM50Q86XT4 DET1-205ENST00000558413 583 ntTSL 4 BASIC23.03■■□□□ 1.28
TRIM50Q86XT4 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TRIM50Q86XT4 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC23.03■■□□□ 1.28
TRIM50Q86XT4 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
TRIM50Q86XT4 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC23.03■■□□□ 1.28
TRIM50Q86XT4 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
TRIM50Q86XT4 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TRIM50Q86XT4 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TRIM50Q86XT4 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
TRIM50Q86XT4 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TRIM50Q86XT4 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TRIM50Q86XT4 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TRIM50Q86XT4 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TRIM50Q86XT4 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC23.02■■□□□ 1.28
TRIM50Q86XT4 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC23.02■■□□□ 1.28
TRIM50Q86XT4 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC23.02■■□□□ 1.28
TRIM50Q86XT4 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TRIM50Q86XT4 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
TRIM50Q86XT4 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC23.02■■□□□ 1.28
TRIM50Q86XT4 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC23.02■■□□□ 1.28
TRIM50Q86XT4 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC23.01■■□□□ 1.27
TRIM50Q86XT4 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC23.01■■□□□ 1.27
TRIM50Q86XT4 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
TRIM50Q86XT4 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
TRIM50Q86XT4 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
TRIM50Q86XT4 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
TRIM50Q86XT4 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
TRIM50Q86XT4 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
TRIM50Q86XT4 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC23.01■■□□□ 1.27
TRIM50Q86XT4 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC23.01■■□□□ 1.27
TRIM50Q86XT4 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
TRIM50Q86XT4 AP003097.1-201ENST00000530657 1135 ntBASIC23.01■■□□□ 1.27
TRIM50Q86XT4 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
TRIM50Q86XT4 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC23.01■■□□□ 1.27
TRIM50Q86XT4 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC23.01■■□□□ 1.27
TRIM50Q86XT4 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
TRIM50Q86XT4 AC012676.1-201ENST00000574705 1949 ntBASIC23■■□□□ 1.27
TRIM50Q86XT4 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC23■■□□□ 1.27
TRIM50Q86XT4 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
TRIM50Q86XT4 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC23■■□□□ 1.27
TRIM50Q86XT4 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC23■■□□□ 1.27
TRIM50Q86XT4 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC23■■□□□ 1.27
TRIM50Q86XT4 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC23■■□□□ 1.27
TRIM50Q86XT4 AC128676.1-201ENST00000454392 318 ntBASIC23■■□□□ 1.27
TRIM50Q86XT4 AC026366.1-201ENST00000488803 879 ntBASIC23■■□□□ 1.27
TRIM50Q86XT4 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC23■■□□□ 1.27
TRIM50Q86XT4 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC23■■□□□ 1.27
TRIM50Q86XT4 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TRIM50Q86XT4 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC23■■□□□ 1.27
TRIM50Q86XT4 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC23■■□□□ 1.27
TRIM50Q86XT4 FBXW4P1-201ENST00000426721 2239 ntBASIC23■■□□□ 1.27
TRIM50Q86XT4 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC23■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms