Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 DDB1-205ENST00000535174 896 ntTSL 317.53■□□□□ 0.41e-6■■■□□ 17.3
SND1Q7KZF4 ELOVL1-211ENST00000482302 984 ntTSL 320.05■□□□□ 0.84e-7■■■□□ 17.3
SND1Q7KZF4 ELOVL1-214ENST00000497050 973 ntTSL 214.12□□□□□ -0.154e-7■■■□□ 17.3
SND1Q7KZF4 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.842e-10■■■□□ 17.3
SND1Q7KZF4 SLC38A10-207ENST00000542075 2903 ntTSL 215.84■□□□□ 0.132e-10■■■□□ 17.3
SND1Q7KZF4 ATP1A1-205ENST00000440951 579 ntTSL 57.42□□□□□ -1.227e-12■■■□□ 17.3
SND1Q7KZF4 PRCP-219ENST00000623464 7072 nt4.44□□□□□ -1.78e-10■■■□□ 17.3
SND1Q7KZF4 SERPINE2-207ENST00000454956 546 ntTSL 417.19■□□□□ 0.344e-9■■■□□ 17.3
SND1Q7KZF4 SERPINE2-210ENST00000489065 563 ntTSL 213.84□□□□□ -0.194e-9■■■□□ 17.3
SND1Q7KZF4 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.172e-7■■■□□ 17.3
SND1Q7KZF4 HEXA-211ENST00000567411 1743 ntTSL 515.85■□□□□ 0.132e-7■■■□□ 17.3
SND1Q7KZF4 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC14.75□□□□□ -0.052e-7■■■□□ 17.3
SND1Q7KZF4 HEXA-201ENST00000268097 5252 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.142e-7■■■□□ 17.3
SND1Q7KZF4 AC119674.2-201ENST00000641494 879 ntAPPRIS ALT27.75□□□□□ -1.172e-6■■■□□ 17.3
SND1Q7KZF4 TMED9-204ENST00000507723 1018 ntTSL 214.85□□□□□ -0.031e-14■■■□□ 17.3
SND1Q7KZF4 HIST1H2AC-201ENST00000314088 1668 ntTSL 1 (best)18.79■□□□□ 0.68e-19■■■□□ 17.3
SND1Q7KZF4 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.338e-19■■■□□ 17.3
SND1Q7KZF4 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.178e-19■■■□□ 17.3
SND1Q7KZF4 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.381e-14■■■□□ 17.3
SND1Q7KZF4 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC16.61■□□□□ 0.252e-7■■■□□ 17.3
SND1Q7KZF4 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC16.61■□□□□ 0.252e-7■■■□□ 17.3
SND1Q7KZF4 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.012e-7■■■□□ 17.3
SND1Q7KZF4 SLC38A5-209ENST00000497336 493 ntTSL 514.94□□□□□ -0.022e-7■■■□□ 17.3
SND1Q7KZF4 SLC38A5-210ENST00000595796 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.132e-7■■■□□ 17.3
SND1Q7KZF4 BCAT1-210ENST00000612790 675 ntTSL 26.95□□□□□ -1.37e-7■■■□□ 17.3
SND1Q7KZF4 HMGCS1-205ENST00000508319 591 ntTSL 313.38□□□□□ -0.272e-15■■■□□ 17.3
SND1Q7KZF4 MGST2-203ENST00000503816 1780 ntTSL 517.3■□□□□ 0.368e-8■■■□□ 17.3
SND1Q7KZF4 MGST2-207ENST00000616265 1278 ntAPPRIS P1 TSL 4 BASIC9.23□□□□□ -0.938e-8■■■□□ 17.3
SND1Q7KZF4 MGST2-206ENST00000515137 1013 ntTSL 1 (best)9.12□□□□□ -0.958e-8■■■□□ 17.3
SND1Q7KZF4 MGST2-204ENST00000506797 634 ntTSL 2 BASIC8.24□□□□□ -1.098e-8■■■□□ 17.3
SND1Q7KZF4 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.288e-8■■■□□ 17.3
SND1Q7KZF4 MGST2-205ENST00000515067 437 ntTSL 36.48□□□□□ -1.378e-8■■■□□ 17.3
SND1Q7KZF4 RNF114-205ENST00000623732 569 ntTSL 525.27■■□□□ 1.648e-16■■■□□ 17.3
SND1Q7KZF4 TNFRSF8-205ENST00000514649 2412 ntTSL 1 (best)20.18■□□□□ 0.822e-8■■■□□ 17.3
SND1Q7KZF4 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.132e-8■■■□□ 17.3
SND1Q7KZF4 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC15.14■□□□□ 0.013e-12■■■□□ 17.3
SND1Q7KZF4 TNFRSF8-203ENST00000417814 3593 ntTSL 1 (best) BASIC14.8□□□□□ -0.042e-8■■■□□ 17.3
SND1Q7KZF4 TNFRSF8-201ENST00000263932 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.042e-8■■■□□ 17.3
SND1Q7KZF4 VPS29-211ENST00000553128 449 ntTSL 313.41□□□□□ -0.262e-8■■■□□ 17.3
SND1Q7KZF4 FEN1-202ENST00000535307 768 ntTSL 212.93□□□□□ -0.343e-12■■■□□ 17.3
SND1Q7KZF4 MCM4-206ENST00000519138 927 ntTSL 212.88□□□□□ -0.352e-8■■■□□ 17.3
SND1Q7KZF4 TIMM23-201ENST00000580018 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.352e-8■■■□□ 17.3
SND1Q7KZF4 PCYOX1-202ENST00000414812 957 ntTSL 312.42□□□□□ -0.422e-7■■■□□ 17.3
SND1Q7KZF4 MCM4-207ENST00000519170 734 ntTSL 311.97□□□□□ -0.492e-8■■■□□ 17.3
SND1Q7KZF4 ADTRP-202ENST00000379415 991 ntTSL 511.41□□□□□ -0.585e-7■■■□□ 17.3
SND1Q7KZF4 MR1-207ENST00000486453 749 ntTSL 311.24□□□□□ -0.612e-8■■■□□ 17.3
SND1Q7KZF4 GNS-205ENST00000540883 544 ntTSL 39.15□□□□□ -0.941e-6■■■□□ 17.3
SND1Q7KZF4 ADTRP-207ENST00000506810 817 ntTSL 38.24□□□□□ -1.095e-7■■■□□ 17.3
SND1Q7KZF4 ADTRP-204ENST00000485323 539 ntTSL 35.7□□□□□ -1.55e-7■■■□□ 17.3
SND1Q7KZF4 PDCD6IP-207ENST00000459659 662 ntTSL 34□□□□□ -1.775e-10■■■□□ 17.3
SND1Q7KZF4 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.72■□□□□ 0.432e-15■■■□□ 17.3
SND1Q7KZF4 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.67■□□□□ 0.422e-15■■■□□ 17.3
SND1Q7KZF4 ATP2A2-208ENST00000549840 503 ntTSL 58.43□□□□□ -1.067e-12■■■□□ 17.3
SND1Q7KZF4 P4HB-213ENST00000484286 759 ntTSL 215.58■□□□□ 0.083e-23■■■□□ 17.3
SND1Q7KZF4 UROD-210ENST00000466193 524 ntTSL 219.25■□□□□ 0.671e-7■■■□□ 17.3
SND1Q7KZF4 UROD-209ENST00000465678 756 ntTSL 213.26□□□□□ -0.291e-7■■■□□ 17.3
SND1Q7KZF4 UROD-212ENST00000472254 934 ntTSL 211.92□□□□□ -0.51e-7■■■□□ 17.3
SND1Q7KZF4 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.12e-6■■■□□ 17.3
SND1Q7KZF4 PDIA5-207ENST00000489923 1651 ntTSL 1 (best)24.55■■□□□ 1.526e-7■■■□□ 17.3
SND1Q7KZF4 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.766e-7■■■□□ 17.3
SND1Q7KZF4 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC29.13■■■□□ 2.252e-12■■■□□ 17.3
SND1Q7KZF4 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.842e-12■■■□□ 17.3
SND1Q7KZF4 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC26.13■■□□□ 1.772e-12■■■□□ 17.3
SND1Q7KZF4 MBOAT7-206ENST00000437868 2033 ntTSL 1 (best)22.08■■□□□ 1.132e-12■■■□□ 17.3
SND1Q7KZF4 MBOAT7-207ENST00000449249 707 ntTSL 520.93■□□□□ 0.942e-12■■■□□ 17.3
SND1Q7KZF4 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.962e-6■■■□□ 17.3
SND1Q7KZF4 CD9-211ENST00000546073 1072 ntTSL 218.29■□□□□ 0.521e-7■■■□□ 17.3
SND1Q7KZF4 CD9-208ENST00000538834 564 ntTSL 514.13□□□□□ -0.151e-7■■■□□ 17.3
SND1Q7KZF4 ASAH1-215ENST00000635769 575 ntTSL 417.34■□□□□ 0.371e-6■■■□□ 17.2
SND1Q7KZF4 ASAH1-252ENST00000637603 579 ntTSL 417.31■□□□□ 0.361e-6■■■□□ 17.2
SND1Q7KZF4 ASAH1-212ENST00000523593 586 ntTSL 516.67■□□□□ 0.261e-6■■■□□ 17.2
SND1Q7KZF4 ASAH1-225ENST00000636299 543 ntTSL 410.05□□□□□ -0.81e-6■■■□□ 17.2
SND1Q7KZF4 ASAH1-237ENST00000636823 571 ntTSL 49.3□□□□□ -0.921e-6■■■□□ 17.2
SND1Q7KZF4 SND1-213ENST00000486037 695 ntTSL 310.12□□□□□ -0.795e-11■■■□□ 17.2
SND1Q7KZF4 SND1-208ENST00000470463 530 ntTSL 411.47□□□□□ -0.576e-11■■■□□ 17.2
SND1Q7KZF4 DAG1-211ENST00000461492 580 ntTSL 319.93■□□□□ 0.782e-8■■■□□ 17.2
SND1Q7KZF4 CES2-211ENST00000568470 3391 ntTSL 212.9□□□□□ -0.343e-7■■■□□ 17.2
SND1Q7KZF4 CES2-202ENST00000417689 3868 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.393e-7■■■□□ 17.2
SND1Q7KZF4 CES2-201ENST00000317091 3927 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.513e-7■■■□□ 17.2
SND1Q7KZF4 HSD17B11-207ENST00000513854 569 ntTSL 510.85□□□□□ -0.672e-10■■■□□ 17.2
SND1Q7KZF4 AC108516.2-201ENST00000508163 349 ntTSL 5 BASIC9.05□□□□□ -0.962e-10■■■□□ 17.2
SND1Q7KZF4 HSD17B11-206ENST00000512344 641 ntTSL 57.35□□□□□ -1.232e-10■■■□□ 17.2
SND1Q7KZF4 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.93■□□□□ 0.622e-10■■■□□ 17.2
SND1Q7KZF4 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC18.72■□□□□ 0.592e-10■■■□□ 17.2
SND1Q7KZF4 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC18.51■□□□□ 0.552e-10■■■□□ 17.2
SND1Q7KZF4 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.89■□□□□ 0.452e-10■■■□□ 17.2
SND1Q7KZF4 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.432e-10■■■□□ 17.2
SND1Q7KZF4 SURF4-205ENST00000467910 693 ntTSL 513.53□□□□□ -0.242e-10■■■□□ 17.2
SND1Q7KZF4 NPC1-205ENST00000587163 431 ntTSL 216.89■□□□□ 0.292e-7■■■□□ 17.2
SND1Q7KZF4 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.896e-7■■■□□ 17.2
SND1Q7KZF4 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.586e-7■■■□□ 17.2
SND1Q7KZF4 COX6C-207ENST00000522934 562 ntTSL 411.91□□□□□ -0.56e-7■■■□□ 17.2
SND1Q7KZF4 COX6C-202ENST00000517682 429 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.826e-7■■■□□ 17.2
SND1Q7KZF4 COX6C-201ENST00000297564 433 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.96e-7■■■□□ 17.2
SND1Q7KZF4 COX6C-206ENST00000520517 566 ntTSL 48.89□□□□□ -0.996e-7■■■□□ 17.2
SND1Q7KZF4 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.216e-7■■■□□ 17.2
SND1Q7KZF4 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.266e-7■■■□□ 17.2
SND1Q7KZF4 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.087e-22■■■□□ 17.2
SND1Q7KZF4 DHCR24-203ENST00000535035 4153 ntTSL 1 (best) BASIC11.97□□□□□ -0.497e-22■■■□□ 17.2
SND1Q7KZF4 SUN1-222ENST00000457861 2975 ntTSL 217.99■□□□□ 0.471e-6■■■□□ 17.2
Retrieved 100 of 13,567 protein–RNA pairs in 106 ms