RNA–Protein interactions for RNA: ENST00000514649.5

TNFRSF8-205, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best)

Gene TNFRSF8, Length 2,412 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-205ENST00000514649 NISCHQ9Y2I1 1504 aa36.12■■■■□ 3.37
TNFRSF8-205ENST00000514649 CCDC180Q9P1Z9 1646 aa31.43■■■□□ 2.62
TNFRSF8-205ENST00000514649 SHROOM4Q9ULL8 1493 aa31.31■■■□□ 2.6
TNFRSF8-205ENST00000514649 SUPT5HO00267 1087 aaKnown RBP30.96■■■□□ 2.55
TNFRSF8-205ENST00000514649 ZCCHC6Q5VYS8 1495 aaKnown RBP30.62■■■□□ 2.49
TNFRSF8-205ENST00000514649 CHIC1Q5VXU3 224 aa30.29■■■□□ 2.44
TNFRSF8-205ENST00000514649 MYO15BQ96JP2 1530 aa30.28■■■□□ 2.44
TNFRSF8-205ENST00000514649 HRCP23327 699 aa30.18■■■□□ 2.42
TNFRSF8-205ENST00000514649 ABCC9O60706 1549 aa30.17■■■□□ 2.42
TNFRSF8-205ENST00000514649 DCAF8L2P0C7V8 631 aa30.03■■■□□ 2.4
TNFRSF8-205ENST00000514649 PCGF6Q9BYE7 350 aa29.9■■■□□ 2.38
TNFRSF8-205ENST00000514649 PELP1Q8IZL8 1130 aaKnown RBP29.7■■■□□ 2.34
TNFRSF8-205ENST00000514649 DCAF1Q9Y4B6 1507 aa29.58■■■□□ 2.33
TNFRSF8-205ENST00000514649 PPARGC1BQ86YN6 1023 aaKnown RBP29.56■■■□□ 2.32
TNFRSF8-205ENST00000514649 LOC105371045A0A1W2PR82 267 aa29.5■■■□□ 2.31
TNFRSF8-205ENST00000514649 NACADO15069 1562 aa29.34■■■□□ 2.29
TNFRSF8-205ENST00000514649 MYT1Q01538 1121 aa29.31■■■□□ 2.28
TNFRSF8-205ENST00000514649 RB1CC1Q8TDY2 1594 aa29.2■■■□□ 2.27
TNFRSF8-205ENST00000514649 TRIM26Q12899 539 aaPredicted RBP29.15■■■□□ 2.26
TNFRSF8-205ENST00000514649 SCRIBQ14160 1630 aa28.96■■■□□ 2.23
TNFRSF8-205ENST00000514649 RSF1Q96T23 1441 aaPredicted RBP28.82■■■□□ 2.2
TNFRSF8-205ENST00000514649 UNC13AQ9UPW8 1703 aa28.76■■■□□ 2.19
TNFRSF8-205ENST00000514649 TRIM41Q8WV44 630 aa28.75■■■□□ 2.19
TNFRSF8-205ENST00000514649 ZEB1P37275 1124 aaPredicted RBP28.69■■■□□ 2.18
TNFRSF8-205ENST00000514649 FAM9AQ8IZU1 332 aaPredicted RBP28.61■■■□□ 2.17
TNFRSF8-205ENST00000514649 BICRAQ9NZM4 1560 aa28.42■■■□□ 2.14
TNFRSF8-205ENST00000514649 EHMT2Q96KQ7 1210 aa28.41■■■□□ 2.14
TNFRSF8-205ENST00000514649 PABPN1Q86U42 306 aaKnown RBP eCLIP28.39■■■□□ 2.13
TNFRSF8-205ENST00000514649 SCAF1Q9H7N4 1312 aaKnown RBP28.25■■■□□ 2.11
TNFRSF8-205ENST00000514649 CECR2Q9BXF3 1484 aa28.23■■■□□ 2.11
TNFRSF8-205ENST00000514649 TTBK1Q5TCY1 1321 aaPredicted RBP28.22■■■□□ 2.11
TNFRSF8-205ENST00000514649 MROH2BQ7Z745 1585 aa28.15■■■□□ 2.1
TNFRSF8-205ENST00000514649 WIZO95785 1651 aa28.04■■■□□ 2.08
TNFRSF8-205ENST00000514649 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.96■■■□□ 2.07
TNFRSF8-205ENST00000514649 CCER1Q8TC90 406 aaPredicted RBP27.88■■■□□ 2.05
TNFRSF8-205ENST00000514649 BAZ1AQ9NRL2 1556 aaPredicted RBP27.81■■■□□ 2.04
TNFRSF8-205ENST00000514649 EIF4G1Q04637 1599 aaKnown RBP27.78■■■□□ 2.04
TNFRSF8-205ENST00000514649 ACIN1Q9UKV3 1341 aaKnown RBP27.69■■■□□ 2.02
TNFRSF8-205ENST00000514649 SMARCA4P51532 1647 aa27.68■■■□□ 2.02
TNFRSF8-205ENST00000514649 NEUROD1Q13562 356 aa27.65■■■□□ 2.02
TNFRSF8-205ENST00000514649 ABCC8Q09428 1581 aa27.61■■■□□ 2.01
TNFRSF8-205ENST00000514649 DIEXFQ68CQ4 756 aaKnown RBP27.6■■■□□ 2.01
TNFRSF8-205ENST00000514649 CCDC88BA6NC98 1476 aa27.6■■■□□ 2.01
TNFRSF8-205ENST00000514649 WRNQ14191 1432 aaPredicted RBP eCLIP27.59■■■□□ 2.01
TNFRSF8-205ENST00000514649 CEP162Q5TB80 1403 aa27.53■■■□□ 2
TNFRSF8-205ENST00000514649 TOP2AP11388 1531 aaKnown RBP27.52■■■□□ 2
TNFRSF8-205ENST00000514649 SOGA1O94964 1423 aa27.47■■□□□ 1.99
TNFRSF8-205ENST00000514649 TNIKQ9UKE5 1360 aa27.44■■□□□ 1.98
TNFRSF8-205ENST00000514649 CENPBP07199 599 aaPredicted RBP27.42■■□□□ 1.98
TNFRSF8-205ENST00000514649 GTF3C3Q9Y5Q9 886 aa27.42■■□□□ 1.98
TNFRSF8-205ENST00000514649 SMARCA2P51531 1590 aa27.42■■□□□ 1.98
TNFRSF8-205ENST00000514649 CSRNP3Q8WYN3 585 aa27.36■■□□□ 1.97
TNFRSF8-205ENST00000514649 UBTFP17480 764 aaKnown RBP27.34■■□□□ 1.97
TNFRSF8-205ENST00000514649 RUSC2Q8N2Y8 1516 aa27.32■■□□□ 1.96
TNFRSF8-205ENST00000514649 PEG3Q9GZU2 1588 aa27.3■■□□□ 1.96
TNFRSF8-205ENST00000514649 ATAD2BQ9ULI0 1458 aa27.3■■□□□ 1.96
TNFRSF8-205ENST00000514649 EEA1Q15075 1411 aa27.29■■□□□ 1.96
TNFRSF8-205ENST00000514649 CC2D2AQ9P2K1 1620 aa27.28■■□□□ 1.96
TNFRSF8-205ENST00000514649 ZNF316A6NFI3 1004 aaPredicted RBP27.26■■□□□ 1.95
TNFRSF8-205ENST00000514649 GOLGA3Q08378 1498 aa27.17■■□□□ 1.94
TNFRSF8-205ENST00000514649 BAZ1BQ9UIG0 1483 aaKnown RBP27.12■■□□□ 1.93
TNFRSF8-205ENST00000514649 NCAPD3P42695 1498 aa27.09■■□□□ 1.93
TNFRSF8-205ENST00000514649 HNRNPUL2Q1KMD3 747 aaKnown RBP27.05■■□□□ 1.92
TNFRSF8-205ENST00000514649 HMGXB3Q12766 1538 aa27.03■■□□□ 1.92
TNFRSF8-205ENST00000514649 YTHDC1Q96MU7 727 aaKnown RBP27.02■■□□□ 1.92
TNFRSF8-205ENST00000514649 DNAJC5BQ9UF47 199 aa27.01■■□□□ 1.91
TNFRSF8-205ENST00000514649 MIER1Q8N108 512 aa26.98■■□□□ 1.91
TNFRSF8-205ENST00000514649 PRKCSHP14314 528 aaPredicted RBP26.97■■□□□ 1.91
TNFRSF8-205ENST00000514649 CEP164Q9UPV0 1460 aa26.96■■□□□ 1.91
TNFRSF8-205ENST00000514649 CLIP1P30622 1438 aa26.92■■□□□ 1.9
TNFRSF8-205ENST00000514649 KIF21BO75037 1637 aa26.9■■□□□ 1.9
TNFRSF8-205ENST00000514649 SYNJ1O43426 1573 aa26.89■■□□□ 1.9
TNFRSF8-205ENST00000514649 VPS8Q8N3P4 1428 aa26.84■■□□□ 1.89
TNFRSF8-205ENST00000514649 APLP2Q06481 763 aa26.8■■□□□ 1.88
TNFRSF8-205ENST00000514649 ERICH6Q7L0X2 663 aa26.76■■□□□ 1.87
TNFRSF8-205ENST00000514649 RAPGEF2Q9Y4G8 1499 aa26.75■■□□□ 1.87
TNFRSF8-205ENST00000514649 RANGAP1P46060 587 aaPredicted RBP26.74■■□□□ 1.87
TNFRSF8-205ENST00000514649 CLSPNQ9HAW4 1339 aa26.52■■□□□ 1.84
TNFRSF8-205ENST00000514649 DHX57Q6P158 1386 aaKnown RBP26.52■■□□□ 1.84
TNFRSF8-205ENST00000514649 BCL11AQ9H165 835 aa26.49■■□□□ 1.83
TNFRSF8-205ENST00000514649 TOP2BQ02880 1626 aa26.48■■□□□ 1.83
TNFRSF8-205ENST00000514649 KANK4Q5T7N3 995 aaPredicted RBP26.44■■□□□ 1.82
TNFRSF8-205ENST00000514649 ARAP1Q96P48 1450 aa26.41■■□□□ 1.82
TNFRSF8-205ENST00000514649 NESP48681 1621 aa26.4■■□□□ 1.82
TNFRSF8-205ENST00000514649 CFTRP13569 1480 aa26.4■■□□□ 1.82
TNFRSF8-205ENST00000514649 PRXQ9BXM0 1461 aa26.39■■□□□ 1.81
TNFRSF8-205ENST00000514649 CADPSQ9ULU8 1353 aa26.38■■□□□ 1.81
TNFRSF8-205ENST00000514649 ERICH3Q5RHP9 1530 aa26.37■■□□□ 1.81
TNFRSF8-205ENST00000514649 BIVM-ERCC5R4GMW8 1640 aa26.35■■□□□ 1.81
TNFRSF8-205ENST00000514649 PRDM2Q13029 1718 aa26.3■■□□□ 1.8
TNFRSF8-205ENST00000514649 RRBP1Q9P2E9 1410 aaKnown RBP26.29■■□□□ 1.8
TNFRSF8-205ENST00000514649 SUPT16HQ9Y5B9 1047 aaKnown RBP26.28■■□□□ 1.8
TNFRSF8-205ENST00000514649 LAMC3Q9Y6N6 1575 aa26.24■■□□□ 1.79
TNFRSF8-205ENST00000514649 CUX2O14529 1486 aa26.19■■□□□ 1.78
TNFRSF8-205ENST00000514649 CCNB3Q8WWL7 1395 aa26.18■■□□□ 1.78
TNFRSF8-205ENST00000514649 ITGAEP38570 1179 aa26.16■■□□□ 1.78
TNFRSF8-205ENST00000514649 KIF27Q86VH2 1401 aa26.16■■□□□ 1.78
TNFRSF8-205ENST00000514649 CUX1P39880 1505 aa26.16■■□□□ 1.78
TNFRSF8-205ENST00000514649 SLC24A1O60721 1099 aa26.14■■□□□ 1.77
TNFRSF8-205ENST00000514649 FANCD2Q9BXW9 1451 aa26.12■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms