Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CASC4Q6P4E1 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CASC4Q6P4E1 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CASC4Q6P4E1 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CASC4Q6P4E1 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CASC4Q6P4E1 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CASC4Q6P4E1 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.98■□□□□ 0.95
CASC4Q6P4E1 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CASC4Q6P4E1 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CASC4Q6P4E1 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CASC4Q6P4E1 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CASC4Q6P4E1 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CASC4Q6P4E1 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CASC4Q6P4E1 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.98■□□□□ 0.95
CASC4Q6P4E1 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CASC4Q6P4E1 AC073314.1-201ENST00000568729 2216 ntBASIC20.97■□□□□ 0.95
CASC4Q6P4E1 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CASC4Q6P4E1 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CASC4Q6P4E1 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CASC4Q6P4E1 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CASC4Q6P4E1 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CASC4Q6P4E1 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CASC4Q6P4E1 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CASC4Q6P4E1 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CASC4Q6P4E1 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CASC4Q6P4E1 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.97■□□□□ 0.95
CASC4Q6P4E1 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.97■□□□□ 0.95
CASC4Q6P4E1 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.96■□□□□ 0.95
CASC4Q6P4E1 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CASC4Q6P4E1 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CASC4Q6P4E1 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CASC4Q6P4E1 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CASC4Q6P4E1 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CASC4Q6P4E1 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CASC4Q6P4E1 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.96■□□□□ 0.95
CASC4Q6P4E1 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CASC4Q6P4E1 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CASC4Q6P4E1 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CASC4Q6P4E1 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CASC4Q6P4E1 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CASC4Q6P4E1 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
CASC4Q6P4E1 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.95
CASC4Q6P4E1 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
CASC4Q6P4E1 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CASC4Q6P4E1 AC007225.1-201ENST00000566331 1836 ntBASIC20.95■□□□□ 0.94
CASC4Q6P4E1 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CASC4Q6P4E1 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CASC4Q6P4E1 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CASC4Q6P4E1 FP700111.2-201ENST00000619190 1892 ntBASIC20.95■□□□□ 0.94
CASC4Q6P4E1 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CASC4Q6P4E1 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CASC4Q6P4E1 POU5F1P4-201ENST00000413175 1085 ntBASIC20.95■□□□□ 0.94
CASC4Q6P4E1 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.95■□□□□ 0.94
CASC4Q6P4E1 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CASC4Q6P4E1 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CASC4Q6P4E1 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CASC4Q6P4E1 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
CASC4Q6P4E1 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CASC4Q6P4E1 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.95■□□□□ 0.94
CASC4Q6P4E1 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.95■□□□□ 0.94
CASC4Q6P4E1 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CASC4Q6P4E1 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CASC4Q6P4E1 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CASC4Q6P4E1 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
CASC4Q6P4E1 AP005212.1-201ENST00000581547 1997 ntBASIC20.94■□□□□ 0.94
CASC4Q6P4E1 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CASC4Q6P4E1 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CASC4Q6P4E1 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CASC4Q6P4E1 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
CASC4Q6P4E1 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.94■□□□□ 0.94
CASC4Q6P4E1 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
CASC4Q6P4E1 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CASC4Q6P4E1 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.94■□□□□ 0.94
CASC4Q6P4E1 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.94■□□□□ 0.94
CASC4Q6P4E1 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.94■□□□□ 0.94
CASC4Q6P4E1 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CASC4Q6P4E1 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CASC4Q6P4E1 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CASC4Q6P4E1 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CASC4Q6P4E1 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CASC4Q6P4E1 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CASC4Q6P4E1 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CASC4Q6P4E1 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CASC4Q6P4E1 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CASC4Q6P4E1 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
CASC4Q6P4E1 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CASC4Q6P4E1 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CASC4Q6P4E1 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.93■□□□□ 0.94
CASC4Q6P4E1 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CASC4Q6P4E1 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CASC4Q6P4E1 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CASC4Q6P4E1 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.93■□□□□ 0.94
CASC4Q6P4E1 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CASC4Q6P4E1 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CASC4Q6P4E1 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CASC4Q6P4E1 AC027612.3-201ENST00000413684 1047 ntBASIC20.93■□□□□ 0.94
CASC4Q6P4E1 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CASC4Q6P4E1 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CASC4Q6P4E1 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CASC4Q6P4E1 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms