Protein–RNA interactions for Protein: Q6NUI1

CCDC144NL, Putative coiled-coil domain-containing protein 144 N-terminal-like, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NLQ6NUI1 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC16.72■□□□□ 0.27
CCDC144NLQ6NUI1 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC16.72■□□□□ 0.27
CCDC144NLQ6NUI1 AC008694.1-202ENST00000636953 945 ntBASIC16.72■□□□□ 0.27
CCDC144NLQ6NUI1 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC144NLQ6NUI1 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC144NLQ6NUI1 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC144NLQ6NUI1 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
CCDC144NLQ6NUI1 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC144NLQ6NUI1 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC144NLQ6NUI1 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC144NLQ6NUI1 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC16.72■□□□□ 0.27
CCDC144NLQ6NUI1 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC144NLQ6NUI1 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC144NLQ6NUI1 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC144NLQ6NUI1 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC16.72■□□□□ 0.27
CCDC144NLQ6NUI1 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC144NLQ6NUI1 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC144NLQ6NUI1 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC144NLQ6NUI1 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC16.71■□□□□ 0.27
CCDC144NLQ6NUI1 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC16.71■□□□□ 0.27
CCDC144NLQ6NUI1 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC16.71■□□□□ 0.27
CCDC144NLQ6NUI1 AC026310.3-201ENST00000625186 2373 ntBASIC16.71■□□□□ 0.27
CCDC144NLQ6NUI1 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC144NLQ6NUI1 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC144NLQ6NUI1 AC007322.3-201ENST00000426526 701 ntBASIC16.71■□□□□ 0.27
CCDC144NLQ6NUI1 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC16.71■□□□□ 0.27
CCDC144NLQ6NUI1 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC16.71■□□□□ 0.27
CCDC144NLQ6NUI1 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC144NLQ6NUI1 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC16.71■□□□□ 0.27
CCDC144NLQ6NUI1 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC144NLQ6NUI1 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC16.71■□□□□ 0.27
CCDC144NLQ6NUI1 PARP1-210ENST00000629232 477 ntTSL 5 BASIC16.71■□□□□ 0.27
CCDC144NLQ6NUI1 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC144NLQ6NUI1 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC16.71■□□□□ 0.27
CCDC144NLQ6NUI1 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC16.71■□□□□ 0.27
CCDC144NLQ6NUI1 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC144NLQ6NUI1 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
CCDC144NLQ6NUI1 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC144NLQ6NUI1 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC144NLQ6NUI1 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
CCDC144NLQ6NUI1 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC144NLQ6NUI1 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC144NLQ6NUI1 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC16.71■□□□□ 0.26
CCDC144NLQ6NUI1 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC144NLQ6NUI1 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
CCDC144NLQ6NUI1 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC144NLQ6NUI1 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC144NLQ6NUI1 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC144NLQ6NUI1 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC144NLQ6NUI1 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CCDC144NLQ6NUI1 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC16.7■□□□□ 0.26
CCDC144NLQ6NUI1 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC144NLQ6NUI1 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CCDC144NLQ6NUI1 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC144NLQ6NUI1 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC16.7■□□□□ 0.26
CCDC144NLQ6NUI1 AC091799.1-201ENST00000422823 811 ntBASIC16.7■□□□□ 0.26
CCDC144NLQ6NUI1 AC026185.1-201ENST00000445748 174 ntBASIC16.7■□□□□ 0.26
CCDC144NLQ6NUI1 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC16.7■□□□□ 0.26
CCDC144NLQ6NUI1 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC144NLQ6NUI1 AC069236.1-201ENST00000604339 616 ntBASIC16.7■□□□□ 0.26
CCDC144NLQ6NUI1 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC16.7■□□□□ 0.26
CCDC144NLQ6NUI1 AC073111.5-205ENST00000641717 521 ntBASIC16.7■□□□□ 0.26
CCDC144NLQ6NUI1 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC144NLQ6NUI1 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC16.7■□□□□ 0.26
CCDC144NLQ6NUI1 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC16.7■□□□□ 0.26
CCDC144NLQ6NUI1 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC144NLQ6NUI1 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC144NLQ6NUI1 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC144NLQ6NUI1 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
CCDC144NLQ6NUI1 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC16.69■□□□□ 0.26
CCDC144NLQ6NUI1 EXOC3-AS1-202ENST00000623673 1663 ntBASIC16.69■□□□□ 0.26
CCDC144NLQ6NUI1 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
CCDC144NLQ6NUI1 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC16.69■□□□□ 0.26
CCDC144NLQ6NUI1 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC144NLQ6NUI1 SAPCD2P1-201ENST00000395413 1184 ntBASIC16.69■□□□□ 0.26
CCDC144NLQ6NUI1 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CCDC144NLQ6NUI1 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
CCDC144NLQ6NUI1 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC16.69■□□□□ 0.26
CCDC144NLQ6NUI1 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC144NLQ6NUI1 FAM21FP-204ENST00000608637 956 ntBASIC16.69■□□□□ 0.26
CCDC144NLQ6NUI1 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC144NLQ6NUI1 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CCDC144NLQ6NUI1 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC144NLQ6NUI1 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC144NLQ6NUI1 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC144NLQ6NUI1 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC144NLQ6NUI1 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC144NLQ6NUI1 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC16.68■□□□□ 0.26
CCDC144NLQ6NUI1 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC16.68■□□□□ 0.26
CCDC144NLQ6NUI1 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
CCDC144NLQ6NUI1 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CCDC144NLQ6NUI1 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CCDC144NLQ6NUI1 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC144NLQ6NUI1 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC144NLQ6NUI1 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC144NLQ6NUI1 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
CCDC144NLQ6NUI1 CNN2P6-201ENST00000439038 900 ntBASIC16.68■□□□□ 0.26
CCDC144NLQ6NUI1 CASP6-205ENST00000505486 538 ntTSL 4 BASIC16.68■□□□□ 0.26
CCDC144NLQ6NUI1 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC16.68■□□□□ 0.26
CCDC144NLQ6NUI1 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms