Protein–RNA interactions for Protein: Q5T1V6

DDX59, Probable ATP-dependent RNA helicase DDX59, humanhuman

Known RBP eCLIP

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX59Q5T1V6 AMDHD2-212ENST00000566706 940 ntTSL 520.51■□□□□ 0.872e-6■■□□□ 13.2
DDX59Q5T1V6 AMDHD2-211ENST00000565963 844 ntTSL 518.87■□□□□ 0.612e-6■■□□□ 13.2
DDX59Q5T1V6 AMDHD2-209ENST00000563633 1117 ntTSL 518.75■□□□□ 0.592e-6■■□□□ 13.2
DDX59Q5T1V6 AMDHD2-214ENST00000567475 714 ntTSL 218.43■□□□□ 0.542e-6■■□□□ 13.2
DDX59Q5T1V6 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.422e-6■■□□□ 13.2
DDX59Q5T1V6 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.35■□□□□ 0.372e-6■■□□□ 13.2
DDX59Q5T1V6 AMDHD2-217ENST00000569879 924 ntTSL 317.34■□□□□ 0.372e-6■■□□□ 13.2
DDX59Q5T1V6 AMDHD2-208ENST00000563556 490 ntTSL 417.34■□□□□ 0.372e-6■■□□□ 13.2
DDX59Q5T1V6 AMDHD2-215ENST00000568263 1482 ntTSL 216.4■□□□□ 0.222e-6■■□□□ 13.2
DDX59Q5T1V6 AMDHD2-216ENST00000569219 735 ntTSL 215.96■□□□□ 0.152e-6■■□□□ 13.2
DDX59Q5T1V6 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.212e-6■■□□□ 13.2
DDX59Q5T1V6 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC13.08□□□□□ -0.312e-6■■□□□ 13.2
DDX59Q5T1V6 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.043e-11■■□□□ 13.2
DDX59Q5T1V6 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC13.46□□□□□ -0.263e-11■■□□□ 13.2
DDX59Q5T1V6 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC12.96□□□□□ -0.333e-11■■□□□ 13.2
DDX59Q5T1V6 TJAP1-205ENST00000372452 2665 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.343e-11■■□□□ 13.2
DDX59Q5T1V6 TJAP1-201ENST00000259751 2720 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.353e-11■■□□□ 13.2
DDX59Q5T1V6 TJAP1-202ENST00000372444 2778 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.43e-11■■□□□ 13.2
DDX59Q5T1V6 TJAP1-203ENST00000372445 2751 ntTSL 1 (best) BASIC12.55□□□□□ -0.43e-11■■□□□ 13.2
DDX59Q5T1V6 TJAP1-210ENST00000454762 3268 ntTSL 1 (best)9.96□□□□□ -0.813e-11■■□□□ 13.2
DDX59Q5T1V6 TJAP1-213ENST00000483640 3468 ntTSL 59.81□□□□□ -0.843e-11■■□□□ 13.2
DDX59Q5T1V6 TJAP1-215ENST00000612912 4312 ntTSL 2 BASIC9.66□□□□□ -0.863e-11■■□□□ 13.2
DDX59Q5T1V6 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.212e-6■■□□□ 13.2
DDX59Q5T1V6 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.632e-6■■□□□ 13.1
DDX59Q5T1V6 SORBS3-204ENST00000517962 885 ntTSL 211.17□□□□□ -0.627e-9■■□□□ 13.1
DDX59Q5T1V6 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.08■□□□□ 0.641e-6■■□□□ 13.1
DDX59Q5T1V6 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.451e-6■■□□□ 13.1
DDX59Q5T1V6 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.441e-6■■□□□ 13.1
DDX59Q5T1V6 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.22■□□□□ 0.191e-6■■□□□ 13.1
DDX59Q5T1V6 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.01■□□□□ 0.151e-6■■□□□ 13.1
DDX59Q5T1V6 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.35□□□□□ -0.111e-6■■□□□ 13.1
DDX59Q5T1V6 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.181e-6■■□□□ 13.1
DDX59Q5T1V6 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.07■□□□□ 0.161e-6■■□□□ 13.1
DDX59Q5T1V6 CEP72-204ENST00000514507 897 ntTSL 312.46□□□□□ -0.413e-7■■□□□ 13.1
DDX59Q5T1V6 ASB16-AS1-203ENST00000591166 754 ntTSL 37.72□□□□□ -1.171e-6■■□□□ 13.1
DDX59Q5T1V6 ASB16-AS1-202ENST00000588785 574 ntTSL 35.92□□□□□ -1.461e-6■■□□□ 13.1
DDX59Q5T1V6 F7-205ENST00000479674 767 ntTSL 521.06■□□□□ 0.966e-8■■□□□ 13.1
DDX59Q5T1V6 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.913e-10■■□□□ 13.1
DDX59Q5T1V6 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.21■□□□□ 0.023e-10■■□□□ 13.1
DDX59Q5T1V6 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.97□□□□□ -0.173e-10■■□□□ 13.1
DDX59Q5T1V6 INPPL1-205ENST00000537755 535 ntTSL 410.69□□□□□ -0.73e-10■■□□□ 13.1
DDX59Q5T1V6 INPPL1-210ENST00000541303 1238 ntTSL 210.69□□□□□ -0.73e-10■■□□□ 13.1
DDX59Q5T1V6 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.27■□□□□ 0.673e-15■■□□□ 13
DDX59Q5T1V6 TCIRG1-215ENST00000533947 956 ntTSL 518.86■□□□□ 0.613e-15■■□□□ 13
DDX59Q5T1V6 TCIRG1-216ENST00000534673 848 ntTSL 318.68■□□□□ 0.583e-15■■□□□ 13
DDX59Q5T1V6 TCIRG1-209ENST00000529657 842 ntTSL 518.22■□□□□ 0.513e-15■■□□□ 13
DDX59Q5T1V6 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.353e-15■■□□□ 13
DDX59Q5T1V6 TCIRG1-202ENST00000524598 940 ntTSL 515.93■□□□□ 0.143e-15■■□□□ 13
DDX59Q5T1V6 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.77□□□□□ -1.818e-7■■□□□ 13
DDX59Q5T1V6 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.697e-9■■□□□ 13
DDX59Q5T1V6 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.47■□□□□ 0.557e-9■■□□□ 13
DDX59Q5T1V6 RGL2-245ENST00000491168 2316 ntTSL 216.52■□□□□ 0.242e-10■■□□□ 13
DDX59Q5T1V6 RGL2-246ENST00000494550 1027 ntTSL 316.48■□□□□ 0.232e-10■■□□□ 13
DDX59Q5T1V6 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.142e-10■■□□□ 13
DDX59Q5T1V6 RGL2-243ENST00000483151 2772 ntTSL 214.92□□□□□ -0.022e-10■■□□□ 13
DDX59Q5T1V6 RGL2-238ENST00000437840 2687 ntTSL 1 (best)14.23□□□□□ -0.132e-10■■□□□ 13
DDX59Q5T1V6 RGL2-242ENST00000478610 1009 ntTSL 312.48□□□□□ -0.412e-10■■□□□ 13
DDX59Q5T1V6 UBE2K-207ENST00000513231 871 ntTSL 1 (best)21.59■■□□□ 1.055e-6■■□□□ 13
DDX59Q5T1V6 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.735e-6■■□□□ 13
DDX59Q5T1V6 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.32■□□□□ 0.525e-6■■□□□ 13
DDX59Q5T1V6 UBE2K-202ENST00000438068 2262 ntTSL 218.31■□□□□ 0.525e-6■■□□□ 13
DDX59Q5T1V6 UBE2K-206ENST00000510934 589 ntTSL 217.77■□□□□ 0.445e-6■■□□□ 13
DDX59Q5T1V6 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.64■□□□□ 0.415e-6■■□□□ 13
DDX59Q5T1V6 UBE2K-205ENST00000510719 566 ntTSL 38.24□□□□□ -1.095e-6■■□□□ 13
DDX59Q5T1V6 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC24.02■■□□□ 1.441e-7■■□□□ 13
DDX59Q5T1V6 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.89■□□□□ 0.131e-7■■□□□ 13
DDX59Q5T1V6 RCOR3-210ENST00000528408 570 ntTSL 215.26■□□□□ 0.031e-7■■□□□ 13
DDX59Q5T1V6 RCOR3-216ENST00000534478 564 ntTSL 414.98□□□□□ -0.011e-7■■□□□ 13
DDX59Q5T1V6 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.021e-7■■□□□ 13
DDX59Q5T1V6 RCOR3-211ENST00000528926 1497 ntTSL 212.26□□□□□ -0.451e-7■■□□□ 13
DDX59Q5T1V6 RCOR3-214ENST00000533469 540 ntTSL 48.51□□□□□ -1.051e-7■■□□□ 13
DDX59Q5T1V6 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.8□□□□□ -0.047e-16■■□□□ 13
DDX59Q5T1V6 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.117e-16■■□□□ 13
DDX59Q5T1V6 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC13.96□□□□□ -0.177e-16■■□□□ 13
DDX59Q5T1V6 CPSF7-223ENST00000544669 1800 ntTSL 512.51□□□□□ -0.417e-16■■□□□ 13
DDX59Q5T1V6 CPSF7-218ENST00000537641 1728 ntTSL 511.72□□□□□ -0.537e-16■■□□□ 13
DDX59Q5T1V6 CPSF7-211ENST00000477890 1234 ntTSL 510.43□□□□□ -0.747e-16■■□□□ 13
DDX59Q5T1V6 CPSF7-206ENST00000448745 1749 ntAPPRIS ALT1 TSL 5 BASIC8.19□□□□□ -1.17e-16■■□□□ 13
DDX59Q5T1V6 CPSF7-219ENST00000539952 953 ntTSL 55.3□□□□□ -1.567e-16■■□□□ 13
DDX59Q5T1V6 C19orf54-205ENST00000596809 1104 ntTSL 519.35■□□□□ 0.697e-7■■□□□ 13
DDX59Q5T1V6 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.42■□□□□ 0.387e-7■■□□□ 13
DDX59Q5T1V6 C19orf54-202ENST00000469741 1792 ntTSL 215.06■□□□□ 07e-7■■□□□ 13
DDX59Q5T1V6 C19orf54-207ENST00000597507 947 ntTSL 214.29□□□□□ -0.127e-7■■□□□ 13
DDX59Q5T1V6 C19orf54-209ENST00000598485 553 ntTSL 5 BASIC10.51□□□□□ -0.737e-7■■□□□ 13
DDX59Q5T1V6 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.115e-6■■□□□ 13
DDX59Q5T1V6 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.15e-6■■□□□ 13
DDX59Q5T1V6 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.37□□□□□ -0.115e-6■■□□□ 13
DDX59Q5T1V6 SWI5-202ENST00000372898 699 ntAPPRIS ALT2 TSL 513.49□□□□□ -0.255e-6■■□□□ 13
DDX59Q5T1V6 SWI5-204ENST00000419867 1048 ntTSL 1 (best) BASIC10.49□□□□□ -0.735e-6■■□□□ 13
DDX59Q5T1V6 SWI5-203ENST00000418976 763 ntAPPRIS ALT2 TSL 2 BASIC10.38□□□□□ -0.755e-6■■□□□ 13
DDX59Q5T1V6 SLC25A10-207ENST00000574129 1523 ntTSL 528.88■■■□□ 2.214e-9■■□□□ 13
DDX59Q5T1V6 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC28■■■□□ 2.074e-9■■□□□ 13
DDX59Q5T1V6 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.284e-9■■□□□ 13
DDX59Q5T1V6 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.33■□□□□ 0.684e-9■■□□□ 13
DDX59Q5T1V6 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.114e-9■■□□□ 13
DDX59Q5T1V6 SLC25A10-204ENST00000570310 595 ntTSL 313.46□□□□□ -0.254e-9■■□□□ 13
DDX59Q5T1V6 SLC25A10-206ENST00000573246 898 ntTSL 312.83□□□□□ -0.364e-9■■□□□ 13
DDX59Q5T1V6 SORBS3-203ENST00000517535 3067 ntTSL 219.38■□□□□ 0.691e-8■■□□□ 13
DDX59Q5T1V6 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.118e-7■■□□□ 12.9
DDX59Q5T1V6 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.344e-12■■□□□ 12.9
Retrieved 100 of 7,289 protein–RNA pairs in 116.5 ms