Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC17.58■□□□□ 0.49e-19■■■□□ 15.9
SRSF1Q07955 SUN1-228ENST00000471349 569 ntTSL 43.88□□□□□ -1.793e-6■■■□□ 15.9
SRSF1Q07955 HMG20B-214ENST00000493191 852 ntTSL 322.28■■□□□ 1.164e-8■■■□□ 15.9
SRSF1Q07955 HMG20B-207ENST00000461099 687 ntTSL 221.86■■□□□ 1.094e-8■■■□□ 15.9
SRSF1Q07955 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.57■□□□□ 0.44e-8■■■□□ 15.9
SRSF1Q07955 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.36■□□□□ 0.374e-8■■■□□ 15.9
SRSF1Q07955 HMG20B-208ENST00000464304 881 ntTSL 217.3■□□□□ 0.364e-8■■■□□ 15.9
SRSF1Q07955 HMG20B-216ENST00000585900 741 ntTSL 317.27■□□□□ 0.364e-8■■■□□ 15.9
SRSF1Q07955 RNF10-224ENST00000546262 776 ntTSL 415.97■□□□□ 0.154e-8■■■□□ 15.9
SRSF1Q07955 PFKL-206ENST00000467315 1947 ntTSL 215.86■□□□□ 0.134e-8■■■□□ 15.9
SRSF1Q07955 HMG20B-212ENST00000487894 1242 ntTSL 215.83■□□□□ 0.124e-8■■■□□ 15.9
SRSF1Q07955 RNF10-204ENST00000535395 414 ntTSL 214.57□□□□□ -0.084e-8■■■□□ 15.9
SRSF1Q07955 SDHD-202ENST00000525291 790 ntTSL 3 BASIC13.94□□□□□ -0.184e-8■■■□□ 15.9
SRSF1Q07955 NAA40-203ENST00000534965 958 ntTSL 213.88□□□□□ -0.194e-8■■■□□ 15.9
SRSF1Q07955 SDHD-209ENST00000640554 727 ntTSL 513.13□□□□□ -0.314e-8■■■□□ 15.9
SRSF1Q07955 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.334e-8■■■□□ 15.9
SRSF1Q07955 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC12.88□□□□□ -0.354e-8■■■□□ 15.9
SRSF1Q07955 NAA40-208ENST00000544138 808 ntTSL 412.82□□□□□ -0.364e-8■■■□□ 15.9
SRSF1Q07955 NAA40-207ENST00000542633 559 ntTSL 512.82□□□□□ -0.364e-8■■■□□ 15.9
SRSF1Q07955 NAA40-205ENST00000539656 577 ntTSL 4 BASIC12.69□□□□□ -0.384e-8■■■□□ 15.9
SRSF1Q07955 PFKL-211ENST00000498841 3122 ntTSL 1 (best)12.65□□□□□ -0.384e-8■■■□□ 15.9
SRSF1Q07955 RNF10-214ENST00000540046 635 ntTSL 312.29□□□□□ -0.444e-8■■■□□ 15.9
SRSF1Q07955 SDHD-211ENST00000525987 968 ntTSL 412.22□□□□□ -0.454e-8■■■□□ 15.9
SRSF1Q07955 SDHD-213ENST00000532699 571 ntTSL 312.22□□□□□ -0.454e-8■■■□□ 15.9
SRSF1Q07955 SDHD-212ENST00000531744 566 ntTSL 212.22□□□□□ -0.454e-8■■■□□ 15.9
SRSF1Q07955 M6PR-204ENST00000539143 650 ntTSL 512.17□□□□□ -0.464e-8■■■□□ 15.9
SRSF1Q07955 SDHD-214ENST00000614349 516 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.464e-8■■■□□ 15.9
SRSF1Q07955 NAA40-209ENST00000544194 929 ntTSL 212.05□□□□□ -0.484e-8■■■□□ 15.9
SRSF1Q07955 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC11.76□□□□□ -0.534e-8■■■□□ 15.9
SRSF1Q07955 M6PR-209ENST00000543704 616 ntTSL 311.7□□□□□ -0.544e-8■■■□□ 15.9
SRSF1Q07955 NAA40-204ENST00000536939 567 ntTSL 211.61□□□□□ -0.554e-8■■■□□ 15.9
SRSF1Q07955 PFKL-204ENST00000460521 2818 ntTSL 211.24□□□□□ -0.614e-8■■■□□ 15.9
SRSF1Q07955 SDHD-204ENST00000528021 1071 ntTSL 3 BASIC11.15□□□□□ -0.624e-8■■■□□ 15.9
SRSF1Q07955 SDHD-205ENST00000528048 905 ntTSL 1 (best) BASIC11.15□□□□□ -0.624e-8■■■□□ 15.9
SRSF1Q07955 M6PR-206ENST00000541507 2198 ntTSL 511.15□□□□□ -0.624e-8■■■□□ 15.9
SRSF1Q07955 AP000553.4-201ENST00000641967 471 ntBASIC10.75□□□□□ -0.694e-8■■■□□ 15.9
SRSF1Q07955 M6PR-208ENST00000543258 561 ntTSL 510.64□□□□□ -0.714e-8■■■□□ 15.9
SRSF1Q07955 SDHD-201ENST00000375549 1439 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.724e-8■■■□□ 15.9
SRSF1Q07955 M6PR-201ENST00000000412 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.784e-8■■■□□ 15.9
SRSF1Q07955 M6PR-212ENST00000544193 255 ntTSL 39.63□□□□□ -0.874e-8■■■□□ 15.9
SRSF1Q07955 RNF10-201ENST00000325954 3825 ntTSL 1 (best) BASIC9.47□□□□□ -0.894e-8■■■□□ 15.9
SRSF1Q07955 XPO5-206ENST00000455285 758 ntTSL 39.43□□□□□ -0.94e-8■■■□□ 15.9
SRSF1Q07955 M6PR-203ENST00000537621 581 ntTSL 29.29□□□□□ -0.924e-8■■■□□ 15.9
SRSF1Q07955 RNF10-203ENST00000413266 2671 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.944e-8■■■□□ 15.9
SRSF1Q07955 HMG20B-210ENST00000483417 580 ntTSL 39.09□□□□□ -0.954e-8■■■□□ 15.9
SRSF1Q07955 RNF10-221ENST00000544124 448 ntTSL 29.09□□□□□ -0.954e-8■■■□□ 15.9
SRSF1Q07955 SDHD-203ENST00000526592 861 ntTSL 3 BASIC9□□□□□ -0.974e-8■■■□□ 15.9
SRSF1Q07955 ADAT2-201ENST00000237283 2065 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.084e-8■■■□□ 15.9
SRSF1Q07955 NAA40-201ENST00000338447 4707 ntTSL 1 (best)8.28□□□□□ -1.084e-8■■■□□ 15.9
SRSF1Q07955 XPO5-205ENST00000450462 633 ntTSL 48.08□□□□□ -1.124e-8■■■□□ 15.9
SRSF1Q07955 SDHD-207ENST00000530923 717 ntTSL 57.44□□□□□ -1.224e-8■■■□□ 15.9
SRSF1Q07955 RNF10-223ENST00000545419 1336 ntTSL 57.28□□□□□ -1.244e-8■■■□□ 15.9
SRSF1Q07955 NAA40-210ENST00000545161 351 ntTSL 36.27□□□□□ -1.414e-8■■■□□ 15.9
SRSF1Q07955 NAA40-202ENST00000377793 3664 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.414e-8■■■□□ 15.9
SRSF1Q07955 XPO5-208ENST00000486936 601 ntTSL 36.24□□□□□ -1.414e-8■■■□□ 15.9
SRSF1Q07955 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.1□□□□□ -1.914e-8■■■□□ 15.9
SRSF1Q07955 TANGO2-226ENST00000490583 888 ntTSL 316.42■□□□□ 0.222e-7■■■□□ 15.9
SRSF1Q07955 SNHG14-212ENST00000549804 7844 ntTSL 5 BASIC10.12□□□□□ -0.792e-6■■■□□ 15.9
SRSF1Q07955 SNHG14-226ENST00000640631 13074 ntTSL 5 BASIC7.34□□□□□ -1.232e-6■■■□□ 15.9
SRSF1Q07955 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.123e-8■■■□□ 15.9
SRSF1Q07955 PPM1G-202ENST00000472077 3752 ntTSL 26.98□□□□□ -1.293e-8■■■□□ 15.9
SRSF1Q07955 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.449e-8■■■□□ 15.9
SRSF1Q07955 FKBP3-204ENST00000557324 643 ntTSL 516.88■□□□□ 0.299e-8■■■□□ 15.9
SRSF1Q07955 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.269e-8■■■□□ 15.9
SRSF1Q07955 ABCG5-203ENST00000409962 2512 ntTSL 214.25□□□□□ -0.132e-6■■■□□ 15.9
SRSF1Q07955 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.342e-6■■■□□ 15.9
SRSF1Q07955 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC12.83□□□□□ -0.362e-6■■■□□ 15.9
SRSF1Q07955 ABCG5-204ENST00000486512 3033 ntTSL 1 (best)11.81□□□□□ -0.522e-6■■■□□ 15.9
SRSF1Q07955 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.154e-6■■■□□ 15.8
SRSF1Q07955 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.234e-6■■■□□ 15.8
SRSF1Q07955 SLC39A7-203ENST00000444757 1015 ntTSL 511□□□□□ -0.654e-6■■■□□ 15.8
SRSF1Q07955 CARS-206ENST00000465240 658 ntTSL 212.58□□□□□ -0.47e-10■■■□□ 15.8
SRSF1Q07955 CCAR1-207ENST00000536012 2447 ntTSL 1 (best)5.89□□□□□ -1.473e-7■■■□□ 15.8
SRSF1Q07955 CCAR1-214ENST00000543225 2407 ntTSL 1 (best)5.66□□□□□ -1.53e-7■■■□□ 15.8
SRSF1Q07955 CCAR1-213ENST00000541012 2432 ntTSL 1 (best)5.4□□□□□ -1.553e-7■■■□□ 15.8
SRSF1Q07955 CCAR1-215ENST00000543229 2475 ntTSL 24.96□□□□□ -1.623e-7■■■□□ 15.8
SRSF1Q07955 CCNL2-209ENST00000471930 846 ntTSL 512.26□□□□□ -0.456e-11■■■□□ 15.8
SRSF1Q07955 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.372e-7■■■□□ 15.8
SRSF1Q07955 SNHG7-202ENST00000416970 789 ntTSL 1 (best)21.07■□□□□ 0.967e-8■■■□□ 15.8
SRSF1Q07955 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC19.15■□□□□ 0.666e-8■■■□□ 15.8
SRSF1Q07955 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC17.47■□□□□ 0.397e-8■■■□□ 15.8
SRSF1Q07955 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.583e-6■■■□□ 15.8
SRSF1Q07955 INTS1-202ENST00000468115 3051 ntTSL 211.3□□□□□ -0.63e-6■■■□□ 15.8
SRSF1Q07955 PILRB-203ENST00000431140 772 ntTSL 313.33□□□□□ -0.281e-7■■■□□ 15.8
SRSF1Q07955 PILRB-212ENST00000608825 587 ntAPPRIS ALT2 TSL 311.11□□□□□ -0.631e-7■■■□□ 15.8
SRSF1Q07955 ANKRD11-209ENST00000564553 471 ntTSL 312.48□□□□□ -0.413e-6■■■□□ 15.8
SRSF1Q07955 ANKRD11-216ENST00000568924 587 ntTSL 412.31□□□□□ -0.443e-6■■■□□ 15.8
SRSF1Q07955 FAM193B-210ENST00000507587 825 ntTSL 216.43■□□□□ 0.224e-8■■■□□ 15.8
SRSF1Q07955 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.376e-10■■■□□ 15.8
SRSF1Q07955 MANF-202ENST00000470900 1509 ntTSL 222.62■■□□□ 1.216e-10■■■□□ 15.8
SRSF1Q07955 RBM14-207ENST00000461478 693 ntTSL 219.91■□□□□ 0.785e-6■■■□□ 15.8
SRSF1Q07955 MANF-201ENST00000446668 846 ntTSL 319.6■□□□□ 0.736e-10■■■□□ 15.8
SRSF1Q07955 FASN-207ENST00000635197 627 ntTSL 315.24■□□□□ 0.035e-6■■■□□ 15.8
SRSF1Q07955 PTAR1-201ENST00000340434 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.638e-9■■■□□ 15.8
SRSF1Q07955 FASN-213ENST00000637693 100 ntTSL 58.44□□□□□ -1.065e-6■■■□□ 15.8
SRSF1Q07955 MAP1B-201ENST00000296755 12036 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.078e-9■■■□□ 15.8
SRSF1Q07955 PTAR1-203ENST00000415701 826 ntTSL 35.19□□□□□ -1.588e-9■■■□□ 15.8
SRSF1Q07955 TFRC-215ENST00000491658 396 ntTSL 54.28□□□□□ -1.725e-17■■■□□ 15.8
SRSF1Q07955 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.36□□□□□ -1.878e-9■■■□□ 15.8
SRSF1Q07955 HNRNPA1-205ENST00000547566 1234 ntTSL 1 (best)15.8■□□□□ 0.121e-11■■■□□ 15.8
Retrieved 100 of 14,836 protein–RNA pairs in 84.5 ms