Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC18.58■□□□□ 0.56
LSM3P62310 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC18.58■□□□□ 0.56
LSM3P62310 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LSM3P62310 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LSM3P62310 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LSM3P62310 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LSM3P62310 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
LSM3P62310 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.58■□□□□ 0.56
LSM3P62310 FP700111.2-201ENST00000619190 1892 ntBASIC18.58■□□□□ 0.56
LSM3P62310 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LSM3P62310 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LSM3P62310 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
LSM3P62310 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LSM3P62310 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LSM3P62310 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LSM3P62310 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC18.57■□□□□ 0.56
LSM3P62310 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
LSM3P62310 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LSM3P62310 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.57■□□□□ 0.56
LSM3P62310 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LSM3P62310 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LSM3P62310 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.57■□□□□ 0.56
LSM3P62310 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC18.57■□□□□ 0.56
LSM3P62310 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.57■□□□□ 0.56
LSM3P62310 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.57■□□□□ 0.56
LSM3P62310 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LSM3P62310 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LSM3P62310 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
LSM3P62310 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LSM3P62310 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.57■□□□□ 0.56
LSM3P62310 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LSM3P62310 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LSM3P62310 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.56■□□□□ 0.56
LSM3P62310 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
LSM3P62310 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
LSM3P62310 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.56■□□□□ 0.56
LSM3P62310 SENP5-202ENST00000419026 973 ntTSL 3 BASIC18.56■□□□□ 0.56
LSM3P62310 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.56■□□□□ 0.56
LSM3P62310 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LSM3P62310 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
LSM3P62310 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
LSM3P62310 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
LSM3P62310 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
LSM3P62310 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
LSM3P62310 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LSM3P62310 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LSM3P62310 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.55■□□□□ 0.56
LSM3P62310 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.55■□□□□ 0.56
LSM3P62310 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LSM3P62310 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LSM3P62310 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LSM3P62310 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
LSM3P62310 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LSM3P62310 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LSM3P62310 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.55■□□□□ 0.56
LSM3P62310 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC18.55■□□□□ 0.56
LSM3P62310 BHLHE23-202ENST00000612929 1109 ntBASIC18.55■□□□□ 0.56
LSM3P62310 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC18.55■□□□□ 0.56
LSM3P62310 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
LSM3P62310 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
LSM3P62310 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LSM3P62310 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LSM3P62310 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LSM3P62310 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LSM3P62310 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.55■□□□□ 0.56
LSM3P62310 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LSM3P62310 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LSM3P62310 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LSM3P62310 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LSM3P62310 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
LSM3P62310 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LSM3P62310 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.54■□□□□ 0.56
LSM3P62310 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LSM3P62310 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.54■□□□□ 0.56
LSM3P62310 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.54■□□□□ 0.56
LSM3P62310 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.54■□□□□ 0.56
LSM3P62310 KRT18P60-201ENST00000312876 1297 ntBASIC18.54■□□□□ 0.56
LSM3P62310 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
LSM3P62310 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
LSM3P62310 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
LSM3P62310 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LSM3P62310 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC18.54■□□□□ 0.56
LSM3P62310 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LSM3P62310 AL499627.2-201ENST00000606283 725 ntBASIC18.54■□□□□ 0.56
LSM3P62310 PVT1_1.1-201ENST00000615125 194 ntBASIC18.54■□□□□ 0.56
LSM3P62310 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LSM3P62310 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
LSM3P62310 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
LSM3P62310 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LSM3P62310 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
LSM3P62310 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
LSM3P62310 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
LSM3P62310 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.54■□□□□ 0.56
LSM3P62310 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
LSM3P62310 NEFHP1-201ENST00000412845 2629 ntBASIC18.53■□□□□ 0.56
LSM3P62310 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
LSM3P62310 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LSM3P62310 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LSM3P62310 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LSM3P62310 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms