Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.25■□□□□ 0.99
PMS2P54278 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PMS2P54278 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PMS2P54278 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PMS2P54278 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PMS2P54278 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PMS2P54278 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PMS2P54278 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
PMS2P54278 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PMS2P54278 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
PMS2P54278 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
PMS2P54278 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.24■□□□□ 0.99
PMS2P54278 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.24■□□□□ 0.99
PMS2P54278 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.24■□□□□ 0.99
PMS2P54278 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.24■□□□□ 0.99
PMS2P54278 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
PMS2P54278 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.24■□□□□ 0.99
PMS2P54278 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PMS2P54278 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PMS2P54278 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
PMS2P54278 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PMS2P54278 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PMS2P54278 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PMS2P54278 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21.23■□□□□ 0.99
PMS2P54278 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PMS2P54278 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PMS2P54278 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PMS2P54278 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
PMS2P54278 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.23■□□□□ 0.99
PMS2P54278 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
PMS2P54278 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
PMS2P54278 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC21.23■□□□□ 0.99
PMS2P54278 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PMS2P54278 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC21.23■□□□□ 0.99
PMS2P54278 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC21.23■□□□□ 0.99
PMS2P54278 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC21.23■□□□□ 0.99
PMS2P54278 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
PMS2P54278 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PMS2P54278 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PMS2P54278 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PMS2P54278 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PMS2P54278 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
PMS2P54278 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PMS2P54278 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC21.22■□□□□ 0.99
PMS2P54278 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC21.22■□□□□ 0.99
PMS2P54278 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PMS2P54278 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.22■□□□□ 0.99
PMS2P54278 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.22■□□□□ 0.99
PMS2P54278 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.22■□□□□ 0.99
PMS2P54278 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PMS2P54278 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PMS2P54278 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
PMS2P54278 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PMS2P54278 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
PMS2P54278 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PMS2P54278 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PMS2P54278 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PMS2P54278 AC099778.1-201ENST00000568593 1911 ntBASIC21.21■□□□□ 0.99
PMS2P54278 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PMS2P54278 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PMS2P54278 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.21■□□□□ 0.99
PMS2P54278 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
PMS2P54278 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.21■□□□□ 0.99
PMS2P54278 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC21.21■□□□□ 0.99
PMS2P54278 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PMS2P54278 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
PMS2P54278 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PMS2P54278 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PMS2P54278 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PMS2P54278 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PMS2P54278 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.21■□□□□ 0.99
PMS2P54278 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.21■□□□□ 0.99
PMS2P54278 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
PMS2P54278 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PMS2P54278 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PMS2P54278 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PMS2P54278 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
PMS2P54278 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.2■□□□□ 0.98
PMS2P54278 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PMS2P54278 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.2■□□□□ 0.98
PMS2P54278 SLC47A1P1-202ENST00000449666 945 ntBASIC21.2■□□□□ 0.98
PMS2P54278 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.2■□□□□ 0.98
PMS2P54278 AC008764.7-201ENST00000593779 1081 ntBASIC21.2■□□□□ 0.98
PMS2P54278 AC087623.3-201ENST00000607047 1098 ntBASIC21.2■□□□□ 0.98
PMS2P54278 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
PMS2P54278 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PMS2P54278 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PMS2P54278 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PMS2P54278 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PMS2P54278 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PMS2P54278 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PMS2P54278 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PMS2P54278 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PMS2P54278 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.19■□□□□ 0.98
PMS2P54278 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PMS2P54278 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
PMS2P54278 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PMS2P54278 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PMS2P54278 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PMS2P54278 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms