Protein–RNA interactions for Protein: P52799

EFNB2, Ephrin-B2, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB2P52799 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
EFNB2P52799 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
EFNB2P52799 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
EFNB2P52799 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
EFNB2P52799 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC17.8■□□□□ 0.44
EFNB2P52799 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
EFNB2P52799 ASL-203ENST00000380839 1765 ntTSL 5 BASIC17.8■□□□□ 0.44
EFNB2P52799 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
EFNB2P52799 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
EFNB2P52799 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
EFNB2P52799 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
EFNB2P52799 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
EFNB2P52799 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
EFNB2P52799 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
EFNB2P52799 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
EFNB2P52799 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
EFNB2P52799 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
EFNB2P52799 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
EFNB2P52799 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
EFNB2P52799 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
EFNB2P52799 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.79■□□□□ 0.44
EFNB2P52799 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
EFNB2P52799 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
EFNB2P52799 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
EFNB2P52799 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
EFNB2P52799 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC17.79■□□□□ 0.44
EFNB2P52799 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
EFNB2P52799 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
EFNB2P52799 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC17.79■□□□□ 0.44
EFNB2P52799 STOX2-205ENST00000513034 807 ntTSL 3 BASIC17.79■□□□□ 0.44
EFNB2P52799 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC17.79■□□□□ 0.44
EFNB2P52799 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
EFNB2P52799 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
EFNB2P52799 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
EFNB2P52799 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
EFNB2P52799 RARG-204ENST00000543726 1779 ntTSL 2 BASIC17.79■□□□□ 0.44
EFNB2P52799 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
EFNB2P52799 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
EFNB2P52799 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.78■□□□□ 0.44
EFNB2P52799 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
EFNB2P52799 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
EFNB2P52799 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
EFNB2P52799 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
EFNB2P52799 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
EFNB2P52799 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
EFNB2P52799 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.78■□□□□ 0.44
EFNB2P52799 AC008764.7-201ENST00000593779 1081 ntBASIC17.78■□□□□ 0.44
EFNB2P52799 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.78■□□□□ 0.44
EFNB2P52799 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
EFNB2P52799 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
EFNB2P52799 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
EFNB2P52799 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.78■□□□□ 0.44
EFNB2P52799 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
EFNB2P52799 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
EFNB2P52799 AC087289.5-201ENST00000586076 3175 ntBASIC17.77■□□□□ 0.44
EFNB2P52799 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
EFNB2P52799 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
EFNB2P52799 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
EFNB2P52799 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
EFNB2P52799 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
EFNB2P52799 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC17.77■□□□□ 0.44
EFNB2P52799 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC17.77■□□□□ 0.44
EFNB2P52799 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC17.77■□□□□ 0.44
EFNB2P52799 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC17.77■□□□□ 0.44
EFNB2P52799 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
EFNB2P52799 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC17.77■□□□□ 0.44
EFNB2P52799 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.77■□□□□ 0.44
EFNB2P52799 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.77■□□□□ 0.44
EFNB2P52799 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.77■□□□□ 0.43
EFNB2P52799 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.77■□□□□ 0.43
EFNB2P52799 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
EFNB2P52799 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
EFNB2P52799 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
EFNB2P52799 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
EFNB2P52799 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.76■□□□□ 0.43
EFNB2P52799 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
EFNB2P52799 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.76■□□□□ 0.43
EFNB2P52799 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC17.76■□□□□ 0.43
EFNB2P52799 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
EFNB2P52799 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
EFNB2P52799 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
EFNB2P52799 AC099791.1-201ENST00000416440 715 ntBASIC17.76■□□□□ 0.43
EFNB2P52799 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC17.76■□□□□ 0.43
EFNB2P52799 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC17.76■□□□□ 0.43
EFNB2P52799 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
EFNB2P52799 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC17.76■□□□□ 0.43
EFNB2P52799 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
EFNB2P52799 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
EFNB2P52799 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
EFNB2P52799 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
EFNB2P52799 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
EFNB2P52799 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
EFNB2P52799 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
EFNB2P52799 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
EFNB2P52799 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
EFNB2P52799 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
EFNB2P52799 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
EFNB2P52799 SNX3-202ENST00000349379 890 ntTSL 2 BASIC17.75■□□□□ 0.43
EFNB2P52799 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
EFNB2P52799 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms