Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCND1P24385 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCND1P24385 AC005224.4-201ENST00000583262 1652 ntBASIC20.67■□□□□ 0.9
CCND1P24385 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCND1P24385 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.67■□□□□ 0.9
CCND1P24385 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCND1P24385 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCND1P24385 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.66■□□□□ 0.9
CCND1P24385 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
CCND1P24385 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.66■□□□□ 0.9
CCND1P24385 AC104564.3-201ENST00000582367 638 ntBASIC20.66■□□□□ 0.9
CCND1P24385 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.66■□□□□ 0.9
CCND1P24385 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCND1P24385 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.66■□□□□ 0.9
CCND1P24385 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCND1P24385 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCND1P24385 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
CCND1P24385 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.66■□□□□ 0.9
CCND1P24385 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCND1P24385 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCND1P24385 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCND1P24385 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCND1P24385 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CCND1P24385 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCND1P24385 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CCND1P24385 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCND1P24385 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCND1P24385 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.65■□□□□ 0.9
CCND1P24385 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCND1P24385 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.65■□□□□ 0.9
CCND1P24385 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.65■□□□□ 0.9
CCND1P24385 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCND1P24385 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCND1P24385 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
CCND1P24385 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCND1P24385 BX323043.1-201ENST00000641006 1765 ntBASIC20.64■□□□□ 0.9
CCND1P24385 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.64■□□□□ 0.9
CCND1P24385 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.64■□□□□ 0.9
CCND1P24385 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CCND1P24385 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.64■□□□□ 0.9
CCND1P24385 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCND1P24385 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCND1P24385 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.64■□□□□ 0.9
CCND1P24385 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.9
CCND1P24385 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCND1P24385 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCND1P24385 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCND1P24385 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCND1P24385 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCND1P24385 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCND1P24385 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCND1P24385 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCND1P24385 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCND1P24385 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CCND1P24385 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.64■□□□□ 0.89
CCND1P24385 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.64■□□□□ 0.89
CCND1P24385 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
CCND1P24385 AC018445.3-201ENST00000624177 1945 ntBASIC20.64■□□□□ 0.89
CCND1P24385 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCND1P24385 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCND1P24385 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CCND1P24385 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCND1P24385 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.63■□□□□ 0.89
CCND1P24385 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCND1P24385 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCND1P24385 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCND1P24385 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCND1P24385 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCND1P24385 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.63■□□□□ 0.89
CCND1P24385 TPRG1LP1-201ENST00000598702 760 ntBASIC20.63■□□□□ 0.89
CCND1P24385 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.63■□□□□ 0.89
CCND1P24385 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCND1P24385 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.63■□□□□ 0.89
CCND1P24385 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CCND1P24385 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CCND1P24385 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.63■□□□□ 0.89
CCND1P24385 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
CCND1P24385 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.63■□□□□ 0.89
CCND1P24385 AP005212.1-201ENST00000581547 1997 ntBASIC20.63■□□□□ 0.89
CCND1P24385 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCND1P24385 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
CCND1P24385 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
CCND1P24385 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
CCND1P24385 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCND1P24385 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCND1P24385 AC055733.4-201ENST00000638462 1354 ntBASIC20.62■□□□□ 0.89
CCND1P24385 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCND1P24385 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCND1P24385 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCND1P24385 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CCND1P24385 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCND1P24385 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.62■□□□□ 0.89
CCND1P24385 MIR6084-201ENST00000622012 110 ntBASIC20.62■□□□□ 0.89
CCND1P24385 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
CCND1P24385 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
CCND1P24385 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCND1P24385 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCND1P24385 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCND1P24385 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.62■□□□□ 0.89
CCND1P24385 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms