Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC22.65■■□□□ 1.22
SYN1P17600 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SYN1P17600 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC22.65■■□□□ 1.22
SYN1P17600 AC087388.1-201ENST00000571370 1112 ntBASIC22.65■■□□□ 1.22
SYN1P17600 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC22.65■■□□□ 1.22
SYN1P17600 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
SYN1P17600 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC22.65■■□□□ 1.22
SYN1P17600 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SYN1P17600 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
SYN1P17600 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
SYN1P17600 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
SYN1P17600 C11orf96-202ENST00000528572 1834 ntBASIC22.64■■□□□ 1.22
SYN1P17600 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC22.64■■□□□ 1.22
SYN1P17600 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
SYN1P17600 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.22
SYN1P17600 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC22.64■■□□□ 1.22
SYN1P17600 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC22.64■■□□□ 1.22
SYN1P17600 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
SYN1P17600 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
SYN1P17600 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
SYN1P17600 PTPA-214ENST00000423100 988 ntTSL 2 BASIC22.64■■□□□ 1.21
SYN1P17600 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC22.64■■□□□ 1.21
SYN1P17600 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC22.64■■□□□ 1.21
SYN1P17600 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC22.64■■□□□ 1.21
SYN1P17600 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
SYN1P17600 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
SYN1P17600 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC22.64■■□□□ 1.21
SYN1P17600 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC22.64■■□□□ 1.21
SYN1P17600 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
SYN1P17600 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
SYN1P17600 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
SYN1P17600 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
SYN1P17600 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
SYN1P17600 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
SYN1P17600 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
SYN1P17600 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
SYN1P17600 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC22.63■■□□□ 1.21
SYN1P17600 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC22.63■■□□□ 1.21
SYN1P17600 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SYN1P17600 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC22.63■■□□□ 1.21
SYN1P17600 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SYN1P17600 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
SYN1P17600 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SYN1P17600 FAM197Y1-201ENST00000421178 764 ntBASIC22.63■■□□□ 1.21
SYN1P17600 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC22.63■■□□□ 1.21
SYN1P17600 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
SYN1P17600 SERP1-205ENST00000487153 657 ntTSL 4 BASIC22.63■■□□□ 1.21
SYN1P17600 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC22.63■■□□□ 1.21
SYN1P17600 AC005829.2-201ENST00000571422 1056 ntBASIC22.63■■□□□ 1.21
SYN1P17600 AF186192.3-201ENST00000583427 947 ntBASIC22.63■■□□□ 1.21
SYN1P17600 RPS15-203ENST00000586096 570 ntTSL 2 BASIC22.63■■□□□ 1.21
SYN1P17600 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC22.63■■□□□ 1.21
SYN1P17600 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SYN1P17600 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SYN1P17600 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SYN1P17600 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SYN1P17600 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC22.63■■□□□ 1.21
SYN1P17600 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SYN1P17600 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SYN1P17600 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC22.62■■□□□ 1.21
SYN1P17600 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC22.62■■□□□ 1.21
SYN1P17600 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC22.62■■□□□ 1.21
SYN1P17600 DUT-205ENST00000558813 769 ntTSL 2 BASIC22.62■■□□□ 1.21
SYN1P17600 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC22.62■■□□□ 1.21
SYN1P17600 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC22.62■■□□□ 1.21
SYN1P17600 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC22.62■■□□□ 1.21
SYN1P17600 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC22.62■■□□□ 1.21
SYN1P17600 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
SYN1P17600 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
SYN1P17600 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SYN1P17600 AC087633.2-202ENST00000565166 1439 ntBASIC22.62■■□□□ 1.21
SYN1P17600 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC22.62■■□□□ 1.21
SYN1P17600 LINC01568-207ENST00000641790 1380 ntBASIC22.62■■□□□ 1.21
SYN1P17600 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC22.61■■□□□ 1.21
SYN1P17600 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC22.61■■□□□ 1.21
SYN1P17600 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
SYN1P17600 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SYN1P17600 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SYN1P17600 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
SYN1P17600 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SYN1P17600 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC22.61■■□□□ 1.21
SYN1P17600 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC22.61■■□□□ 1.21
SYN1P17600 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
SYN1P17600 CFL2-205ENST00000555765 632 ntTSL 2 BASIC22.61■■□□□ 1.21
SYN1P17600 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC22.61■■□□□ 1.21
SYN1P17600 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC22.61■■□□□ 1.21
SYN1P17600 RBM42-202ENST00000586618 771 ntTSL 3 BASIC22.61■■□□□ 1.21
SYN1P17600 AL121894.2-201ENST00000602977 491 ntBASIC22.61■■□□□ 1.21
SYN1P17600 DECR2-212ENST00000627716 352 ntTSL 2 BASIC22.61■■□□□ 1.21
SYN1P17600 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
SYN1P17600 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SYN1P17600 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
SYN1P17600 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC22.61■■□□□ 1.21
SYN1P17600 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
SYN1P17600 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
SYN1P17600 AC079598.2-202ENST00000546624 1451 ntBASIC22.6■■□□□ 1.21
SYN1P17600 HTR7P1-201ENST00000538670 1336 ntBASIC22.6■■□□□ 1.21
SYN1P17600 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
SYN1P17600 TERF1P1-201ENST00000311003 1181 ntBASIC22.6■■□□□ 1.21
SYN1P17600 AL137013.1-201ENST00000432946 1228 ntBASIC22.6■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms