Protein–RNA interactions for Protein: P09455

RBP1, Retinol-binding protein 1, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBP1P09455 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.31■□□□□ 0.84
RBP1P09455 AC138907.5-202ENST00000569484 235 ntBASIC20.31■□□□□ 0.84
RBP1P09455 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
RBP1P09455 MIR6084-201ENST00000622012 110 ntBASIC20.31■□□□□ 0.84
RBP1P09455 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.31■□□□□ 0.84
RBP1P09455 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
RBP1P09455 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RBP1P09455 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
RBP1P09455 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.31■□□□□ 0.84
RBP1P09455 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RBP1P09455 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
RBP1P09455 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RBP1P09455 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RBP1P09455 KRT16P2-201ENST00000414673 1423 ntBASIC20.3■□□□□ 0.84
RBP1P09455 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
RBP1P09455 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RBP1P09455 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RBP1P09455 AC120498.10-201ENST00000621827 505 ntBASIC20.3■□□□□ 0.84
RBP1P09455 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RBP1P09455 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RBP1P09455 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RBP1P09455 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RBP1P09455 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
RBP1P09455 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RBP1P09455 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.3■□□□□ 0.84
RBP1P09455 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RBP1P09455 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.29■□□□□ 0.84
RBP1P09455 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RBP1P09455 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RBP1P09455 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.29■□□□□ 0.84
RBP1P09455 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RBP1P09455 IRS3P-201ENST00000223076 1006 ntBASIC20.29■□□□□ 0.84
RBP1P09455 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
RBP1P09455 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.29■□□□□ 0.84
RBP1P09455 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RBP1P09455 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
RBP1P09455 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RBP1P09455 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RBP1P09455 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.29■□□□□ 0.84
RBP1P09455 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RBP1P09455 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
RBP1P09455 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.29■□□□□ 0.84
RBP1P09455 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
RBP1P09455 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
RBP1P09455 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.28■□□□□ 0.84
RBP1P09455 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RBP1P09455 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RBP1P09455 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.28■□□□□ 0.84
RBP1P09455 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.28■□□□□ 0.84
RBP1P09455 AC245052.3-201ENST00000450182 901 ntBASIC20.28■□□□□ 0.84
RBP1P09455 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.28■□□□□ 0.84
RBP1P09455 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.28■□□□□ 0.84
RBP1P09455 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.28■□□□□ 0.84
RBP1P09455 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.28■□□□□ 0.84
RBP1P09455 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RBP1P09455 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RBP1P09455 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.28■□□□□ 0.84
RBP1P09455 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RBP1P09455 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RBP1P09455 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
RBP1P09455 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RBP1P09455 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RBP1P09455 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RBP1P09455 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RBP1P09455 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RBP1P09455 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
RBP1P09455 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RBP1P09455 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.27■□□□□ 0.84
RBP1P09455 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
RBP1P09455 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
RBP1P09455 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RBP1P09455 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.27■□□□□ 0.84
RBP1P09455 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RBP1P09455 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
RBP1P09455 RARRES2P11-201ENST00000635158 484 ntBASIC20.27■□□□□ 0.84
RBP1P09455 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RBP1P09455 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RBP1P09455 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
RBP1P09455 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
RBP1P09455 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
RBP1P09455 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RBP1P09455 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RBP1P09455 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
RBP1P09455 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RBP1P09455 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RBP1P09455 AC027612.3-201ENST00000413684 1047 ntBASIC20.26■□□□□ 0.83
RBP1P09455 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RBP1P09455 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.26■□□□□ 0.83
RBP1P09455 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RBP1P09455 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RBP1P09455 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
RBP1P09455 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RBP1P09455 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.26■□□□□ 0.83
RBP1P09455 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RBP1P09455 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RBP1P09455 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.26■□□□□ 0.83
RBP1P09455 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.26■□□□□ 0.83
RBP1P09455 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
RBP1P09455 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RBP1P09455 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms