Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC17.11■□□□□ 0.33
CTSDP07339 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CTSDP07339 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTSDP07339 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTSDP07339 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTSDP07339 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTSDP07339 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CTSDP07339 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CTSDP07339 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.11■□□□□ 0.33
CTSDP07339 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTSDP07339 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CTSDP07339 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CTSDP07339 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.1■□□□□ 0.33
CTSDP07339 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTSDP07339 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTSDP07339 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CTSDP07339 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CTSDP07339 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTSDP07339 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTSDP07339 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTSDP07339 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTSDP07339 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTSDP07339 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTSDP07339 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CTSDP07339 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTSDP07339 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CTSDP07339 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTSDP07339 SERBP1P1-201ENST00000396021 1160 ntBASIC17.1■□□□□ 0.33
CTSDP07339 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC17.1■□□□□ 0.33
CTSDP07339 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CTSDP07339 AL356441.2-201ENST00000443009 864 ntBASIC17.1■□□□□ 0.33
CTSDP07339 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC17.1■□□□□ 0.33
CTSDP07339 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTSDP07339 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
CTSDP07339 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CTSDP07339 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.09■□□□□ 0.33
CTSDP07339 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CTSDP07339 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.09■□□□□ 0.33
CTSDP07339 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTSDP07339 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC17.09■□□□□ 0.33
CTSDP07339 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC17.09■□□□□ 0.33
CTSDP07339 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTSDP07339 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTSDP07339 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTSDP07339 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTSDP07339 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.09■□□□□ 0.33
CTSDP07339 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTSDP07339 ASL-203ENST00000380839 1765 ntTSL 5 BASIC17.09■□□□□ 0.33
CTSDP07339 TCF3P1-201ENST00000423021 1937 ntBASIC17.09■□□□□ 0.33
CTSDP07339 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.09■□□□□ 0.33
CTSDP07339 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTSDP07339 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CTSDP07339 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
CTSDP07339 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
CTSDP07339 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CTSDP07339 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.08■□□□□ 0.33
CTSDP07339 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CTSDP07339 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC17.08■□□□□ 0.33
CTSDP07339 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CTSDP07339 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CTSDP07339 AC009237.3-201ENST00000393279 1427 ntBASIC17.08■□□□□ 0.32
CTSDP07339 DUX4L19-201ENST00000557448 1267 ntBASIC17.08■□□□□ 0.32
CTSDP07339 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
CTSDP07339 AC011298.3-201ENST00000615796 283 ntBASIC17.08■□□□□ 0.32
CTSDP07339 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CTSDP07339 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
CTSDP07339 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.08■□□□□ 0.32
CTSDP07339 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CTSDP07339 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CTSDP07339 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.07■□□□□ 0.32
CTSDP07339 AC092720.2-201ENST00000602388 1665 ntBASIC17.07■□□□□ 0.32
CTSDP07339 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTSDP07339 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTSDP07339 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTSDP07339 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC17.07■□□□□ 0.32
CTSDP07339 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC17.07■□□□□ 0.32
CTSDP07339 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTSDP07339 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTSDP07339 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTSDP07339 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTSDP07339 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTSDP07339 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
CTSDP07339 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTSDP07339 PXK-203ENST00000383715 1756 ntTSL 5 BASIC17.07■□□□□ 0.32
CTSDP07339 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CTSDP07339 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CTSDP07339 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CTSDP07339 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CTSDP07339 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CTSDP07339 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.06■□□□□ 0.32
CTSDP07339 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTSDP07339 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CTSDP07339 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC17.06■□□□□ 0.32
CTSDP07339 AC055733.4-201ENST00000638462 1354 ntBASIC17.06■□□□□ 0.32
CTSDP07339 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTSDP07339 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTSDP07339 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTSDP07339 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.06■□□□□ 0.32
CTSDP07339 BX323043.1-201ENST00000641006 1765 ntBASIC17.06■□□□□ 0.32
CTSDP07339 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms