Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.66■□□□□ 0.58
HMGN1P05114 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.65■□□□□ 0.58
HMGN1P05114 AP004607.4-201ENST00000530158 1459 ntBASIC18.65■□□□□ 0.58
HMGN1P05114 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.65■□□□□ 0.58
HMGN1P05114 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HMGN1P05114 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
HMGN1P05114 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HMGN1P05114 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HMGN1P05114 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.65■□□□□ 0.58
HMGN1P05114 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.65■□□□□ 0.58
HMGN1P05114 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HMGN1P05114 AC024257.2-201ENST00000549699 147 ntBASIC18.65■□□□□ 0.58
HMGN1P05114 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.65■□□□□ 0.58
HMGN1P05114 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HMGN1P05114 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HMGN1P05114 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.65■□□□□ 0.58
HMGN1P05114 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HMGN1P05114 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HMGN1P05114 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
HMGN1P05114 AL162377.1-201ENST00000618844 1793 ntBASIC18.65■□□□□ 0.58
HMGN1P05114 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HMGN1P05114 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HMGN1P05114 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
HMGN1P05114 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
HMGN1P05114 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
HMGN1P05114 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
HMGN1P05114 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
HMGN1P05114 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
HMGN1P05114 AC053503.5-201ENST00000601508 636 ntBASIC18.64■□□□□ 0.57
HMGN1P05114 AL136162.1-201ENST00000607711 1078 ntBASIC18.64■□□□□ 0.57
HMGN1P05114 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HMGN1P05114 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HMGN1P05114 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
HMGN1P05114 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.64■□□□□ 0.57
HMGN1P05114 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HMGN1P05114 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.64■□□□□ 0.57
HMGN1P05114 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HMGN1P05114 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.63■□□□□ 0.57
HMGN1P05114 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.63■□□□□ 0.57
HMGN1P05114 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
HMGN1P05114 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.63■□□□□ 0.57
HMGN1P05114 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HMGN1P05114 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
HMGN1P05114 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HMGN1P05114 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC18.63■□□□□ 0.57
HMGN1P05114 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
HMGN1P05114 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
HMGN1P05114 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.63■□□□□ 0.57
HMGN1P05114 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.63■□□□□ 0.57
HMGN1P05114 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.63■□□□□ 0.57
HMGN1P05114 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
HMGN1P05114 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HMGN1P05114 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HMGN1P05114 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
HMGN1P05114 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HMGN1P05114 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
HMGN1P05114 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HMGN1P05114 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.62■□□□□ 0.57
HMGN1P05114 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
HMGN1P05114 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HMGN1P05114 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HMGN1P05114 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HMGN1P05114 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.62■□□□□ 0.57
HMGN1P05114 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HMGN1P05114 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.62■□□□□ 0.57
HMGN1P05114 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HMGN1P05114 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.62■□□□□ 0.57
HMGN1P05114 AC008764.7-201ENST00000593779 1081 ntBASIC18.62■□□□□ 0.57
HMGN1P05114 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC18.62■□□□□ 0.57
HMGN1P05114 AC135279.3-201ENST00000610945 1311 ntBASIC18.62■□□□□ 0.57
HMGN1P05114 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HMGN1P05114 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HMGN1P05114 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HMGN1P05114 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
HMGN1P05114 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.62■□□□□ 0.57
HMGN1P05114 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.62■□□□□ 0.57
HMGN1P05114 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HMGN1P05114 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HMGN1P05114 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.61■□□□□ 0.57
HMGN1P05114 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HMGN1P05114 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
HMGN1P05114 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HMGN1P05114 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
HMGN1P05114 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
HMGN1P05114 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.61■□□□□ 0.57
HMGN1P05114 GRAMD4P2-201ENST00000423297 1097 ntBASIC18.61■□□□□ 0.57
HMGN1P05114 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.61■□□□□ 0.57
HMGN1P05114 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HMGN1P05114 EEF1DP3-203ENST00000566025 782 ntBASIC18.61■□□□□ 0.57
HMGN1P05114 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.61■□□□□ 0.57
HMGN1P05114 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HMGN1P05114 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.6■□□□□ 0.57
HMGN1P05114 AL391422.3-201ENST00000603791 2761 ntBASIC18.6■□□□□ 0.57
HMGN1P05114 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.6■□□□□ 0.57
HMGN1P05114 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
HMGN1P05114 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.6■□□□□ 0.57
HMGN1P05114 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
HMGN1P05114 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.6■□□□□ 0.57
HMGN1P05114 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HMGN1P05114 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms