Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
GPC4O75487 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
GPC4O75487 AC061975.6-201ENST00000579045 1553 ntBASIC20.6■□□□□ 0.89
GPC4O75487 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.6■□□□□ 0.89
GPC4O75487 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
GPC4O75487 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
GPC4O75487 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
GPC4O75487 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
GPC4O75487 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.6■□□□□ 0.89
GPC4O75487 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
GPC4O75487 POU5F1P4-201ENST00000413175 1085 ntBASIC20.6■□□□□ 0.89
GPC4O75487 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.6■□□□□ 0.89
GPC4O75487 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.6■□□□□ 0.89
GPC4O75487 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
GPC4O75487 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
GPC4O75487 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
GPC4O75487 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
GPC4O75487 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
GPC4O75487 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
GPC4O75487 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GPC4O75487 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
GPC4O75487 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GPC4O75487 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GPC4O75487 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
GPC4O75487 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GPC4O75487 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.59■□□□□ 0.89
GPC4O75487 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
GPC4O75487 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.59■□□□□ 0.89
GPC4O75487 AL162430.1-201ENST00000480705 870 ntBASIC20.59■□□□□ 0.89
GPC4O75487 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.59■□□□□ 0.89
GPC4O75487 AC008175.2-201ENST00000612840 297 ntBASIC20.59■□□□□ 0.89
GPC4O75487 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.59■□□□□ 0.89
GPC4O75487 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
GPC4O75487 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GPC4O75487 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GPC4O75487 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.59■□□□□ 0.89
GPC4O75487 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GPC4O75487 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
GPC4O75487 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
GPC4O75487 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
GPC4O75487 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
GPC4O75487 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
GPC4O75487 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
GPC4O75487 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
GPC4O75487 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
GPC4O75487 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
GPC4O75487 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
GPC4O75487 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
GPC4O75487 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.58■□□□□ 0.89
GPC4O75487 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
GPC4O75487 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
GPC4O75487 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.58■□□□□ 0.89
GPC4O75487 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.58■□□□□ 0.89
GPC4O75487 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
GPC4O75487 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.58■□□□□ 0.89
GPC4O75487 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.58■□□□□ 0.89
GPC4O75487 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
GPC4O75487 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
GPC4O75487 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
GPC4O75487 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
GPC4O75487 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
GPC4O75487 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
GPC4O75487 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.57■□□□□ 0.88
GPC4O75487 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GPC4O75487 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GPC4O75487 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GPC4O75487 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.57■□□□□ 0.88
GPC4O75487 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.57■□□□□ 0.88
GPC4O75487 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
GPC4O75487 KRT18P20-201ENST00000548986 1279 ntBASIC20.57■□□□□ 0.88
GPC4O75487 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
GPC4O75487 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GPC4O75487 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
GPC4O75487 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
GPC4O75487 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
GPC4O75487 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.57■□□□□ 0.88
GPC4O75487 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
GPC4O75487 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GPC4O75487 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
GPC4O75487 AIRN-201ENST00000601203 4374 ntBASIC20.56■□□□□ 0.88
GPC4O75487 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.56■□□□□ 0.88
GPC4O75487 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GPC4O75487 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
GPC4O75487 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.56■□□□□ 0.88
GPC4O75487 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
GPC4O75487 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
GPC4O75487 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
GPC4O75487 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GPC4O75487 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.56■□□□□ 0.88
GPC4O75487 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.56■□□□□ 0.88
GPC4O75487 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
GPC4O75487 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GPC4O75487 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
GPC4O75487 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GPC4O75487 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
GPC4O75487 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GPC4O75487 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
GPC4O75487 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.55■□□□□ 0.88
GPC4O75487 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.55■□□□□ 0.88
GPC4O75487 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms