Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
RIPK2O43353 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.94■□□□□ 0.94
RIPK2O43353 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RIPK2O43353 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RIPK2O43353 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RIPK2O43353 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.94■□□□□ 0.94
RIPK2O43353 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.94■□□□□ 0.94
RIPK2O43353 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RIPK2O43353 AL035685.1-201ENST00000636663 812 ntBASIC20.94■□□□□ 0.94
RIPK2O43353 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.94■□□□□ 0.94
RIPK2O43353 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.94■□□□□ 0.94
RIPK2O43353 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RIPK2O43353 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RIPK2O43353 AC092720.2-201ENST00000602388 1665 ntBASIC20.93■□□□□ 0.94
RIPK2O43353 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.93■□□□□ 0.94
RIPK2O43353 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RIPK2O43353 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RIPK2O43353 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
RIPK2O43353 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
RIPK2O43353 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
RIPK2O43353 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RIPK2O43353 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RIPK2O43353 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.93■□□□□ 0.94
RIPK2O43353 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.93■□□□□ 0.94
RIPK2O43353 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.93■□□□□ 0.94
RIPK2O43353 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.93■□□□□ 0.94
RIPK2O43353 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.93■□□□□ 0.94
RIPK2O43353 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RIPK2O43353 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.93■□□□□ 0.94
RIPK2O43353 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
RIPK2O43353 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
RIPK2O43353 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
RIPK2O43353 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
RIPK2O43353 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RIPK2O43353 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RIPK2O43353 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.93■□□□□ 0.94
RIPK2O43353 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RIPK2O43353 AC005224.4-201ENST00000583262 1652 ntBASIC20.93■□□□□ 0.94
RIPK2O43353 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.93■□□□□ 0.94
RIPK2O43353 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RIPK2O43353 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.92■□□□□ 0.94
RIPK2O43353 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RIPK2O43353 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.92■□□□□ 0.94
RIPK2O43353 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RIPK2O43353 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.92■□□□□ 0.94
RIPK2O43353 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
RIPK2O43353 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.92■□□□□ 0.94
RIPK2O43353 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RIPK2O43353 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.92■□□□□ 0.94
RIPK2O43353 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.92■□□□□ 0.94
RIPK2O43353 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RIPK2O43353 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RIPK2O43353 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RIPK2O43353 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
RIPK2O43353 BX842568.3-201ENST00000418104 571 ntBASIC20.91■□□□□ 0.94
RIPK2O43353 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.91■□□□□ 0.94
RIPK2O43353 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
RIPK2O43353 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.91■□□□□ 0.94
RIPK2O43353 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.91■□□□□ 0.94
RIPK2O43353 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.91■□□□□ 0.94
RIPK2O43353 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RIPK2O43353 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RIPK2O43353 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
RIPK2O43353 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.9■□□□□ 0.94
RIPK2O43353 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.9■□□□□ 0.94
RIPK2O43353 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RIPK2O43353 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RIPK2O43353 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RIPK2O43353 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RIPK2O43353 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
RIPK2O43353 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.9■□□□□ 0.94
RIPK2O43353 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
RIPK2O43353 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
RIPK2O43353 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.9■□□□□ 0.94
RIPK2O43353 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.9■□□□□ 0.94
RIPK2O43353 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RIPK2O43353 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
RIPK2O43353 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RIPK2O43353 AC116562.4-201ENST00000641316 2276 ntBASIC20.9■□□□□ 0.94
RIPK2O43353 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
RIPK2O43353 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.9■□□□□ 0.94
RIPK2O43353 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RIPK2O43353 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.89■□□□□ 0.94
RIPK2O43353 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.89■□□□□ 0.94
RIPK2O43353 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RIPK2O43353 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.89■□□□□ 0.94
RIPK2O43353 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RIPK2O43353 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RIPK2O43353 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.89■□□□□ 0.93
RIPK2O43353 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.89■□□□□ 0.93
RIPK2O43353 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.89■□□□□ 0.93
RIPK2O43353 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.89■□□□□ 0.93
RIPK2O43353 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.89■□□□□ 0.93
RIPK2O43353 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RIPK2O43353 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
RIPK2O43353 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RIPK2O43353 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.89■□□□□ 0.93
RIPK2O43353 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.89■□□□□ 0.93
RIPK2O43353 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.89■□□□□ 0.93
RIPK2O43353 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms