Protein–RNA interactions for Protein: O00421

CCRL2, C-C chemokine receptor-like 2, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCRL2O00421 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCRL2O00421 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CCRL2O00421 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCRL2O00421 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCRL2O00421 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCRL2O00421 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCRL2O00421 FP700111.2-201ENST00000619190 1892 ntBASIC18.5■□□□□ 0.55
CCRL2O00421 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.5■□□□□ 0.55
CCRL2O00421 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.5■□□□□ 0.55
CCRL2O00421 AC116562.4-201ENST00000641316 2276 ntBASIC18.5■□□□□ 0.55
CCRL2O00421 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CCRL2O00421 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.5■□□□□ 0.55
CCRL2O00421 MIR4787-201ENST00000607364 84 ntBASIC18.5■□□□□ 0.55
CCRL2O00421 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC18.5■□□□□ 0.55
CCRL2O00421 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCRL2O00421 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCRL2O00421 AC098818.2-201ENST00000564925 2320 ntBASIC18.5■□□□□ 0.55
CCRL2O00421 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.5■□□□□ 0.55
CCRL2O00421 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCRL2O00421 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CCRL2O00421 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCRL2O00421 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCRL2O00421 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCRL2O00421 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCRL2O00421 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCRL2O00421 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC18.49■□□□□ 0.55
CCRL2O00421 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CCRL2O00421 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
CCRL2O00421 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.49■□□□□ 0.55
CCRL2O00421 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCRL2O00421 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCRL2O00421 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCRL2O00421 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCRL2O00421 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.49■□□□□ 0.55
CCRL2O00421 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CCRL2O00421 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
CCRL2O00421 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCRL2O00421 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCRL2O00421 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCRL2O00421 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCRL2O00421 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.48■□□□□ 0.55
CCRL2O00421 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCRL2O00421 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CCRL2O00421 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCRL2O00421 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCRL2O00421 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCRL2O00421 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCRL2O00421 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCRL2O00421 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCRL2O00421 CD72-202ENST00000378430 585 ntTSL 3 BASIC18.48■□□□□ 0.55
CCRL2O00421 TFPT-201ENST00000391757 774 ntTSL 5 BASIC18.48■□□□□ 0.55
CCRL2O00421 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCRL2O00421 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC18.48■□□□□ 0.55
CCRL2O00421 AC092028.1-203ENST00000608262 953 ntBASIC18.48■□□□□ 0.55
CCRL2O00421 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCRL2O00421 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCRL2O00421 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCRL2O00421 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCRL2O00421 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCRL2O00421 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CCRL2O00421 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCRL2O00421 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCRL2O00421 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCRL2O00421 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCRL2O00421 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.47■□□□□ 0.55
CCRL2O00421 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCRL2O00421 HES6-204ENST00000409182 863 ntTSL 2 BASIC18.47■□□□□ 0.55
CCRL2O00421 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
CCRL2O00421 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.47■□□□□ 0.55
CCRL2O00421 pRNA.6-201ENST00000610482 90 ntBASIC18.47■□□□□ 0.55
CCRL2O00421 pRNA.5-201ENST00000612139 90 ntBASIC18.47■□□□□ 0.55
CCRL2O00421 pRNA.11-201ENST00000618423 90 ntBASIC18.47■□□□□ 0.55
CCRL2O00421 pRNA.13-201ENST00000619112 90 ntBASIC18.47■□□□□ 0.55
CCRL2O00421 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCRL2O00421 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCRL2O00421 GATM-206ENST00000558336 1522 ntTSL 2 BASIC18.47■□□□□ 0.55
CCRL2O00421 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.47■□□□□ 0.55
CCRL2O00421 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCRL2O00421 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCRL2O00421 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCRL2O00421 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.47■□□□□ 0.55
CCRL2O00421 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCRL2O00421 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCRL2O00421 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CCRL2O00421 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCRL2O00421 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCRL2O00421 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCRL2O00421 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.46■□□□□ 0.55
CCRL2O00421 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CCRL2O00421 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCRL2O00421 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCRL2O00421 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCRL2O00421 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCRL2O00421 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCRL2O00421 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
CCRL2O00421 AP006587.3-201ENST00000525742 1516 ntBASIC18.46■□□□□ 0.55
CCRL2O00421 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCRL2O00421 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCRL2O00421 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCRL2O00421 MTDHP2-201ENST00000601468 714 ntBASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms