Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.44■■□□□ 1.02
CCDC188H7C350 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC188H7C350 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC21.43■■□□□ 1.02
CCDC188H7C350 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC188H7C350 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC188H7C350 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.43■■□□□ 1.02
CCDC188H7C350 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
CCDC188H7C350 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC188H7C350 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.43■■□□□ 1.02
CCDC188H7C350 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.43■■□□□ 1.02
CCDC188H7C350 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.43■■□□□ 1.02
CCDC188H7C350 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC188H7C350 AP004607.4-201ENST00000530158 1459 ntBASIC21.43■■□□□ 1.02
CCDC188H7C350 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC188H7C350 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC188H7C350 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC188H7C350 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC21.43■■□□□ 1.02
CCDC188H7C350 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCDC188H7C350 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.42■■□□□ 1.02
CCDC188H7C350 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCDC188H7C350 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
CCDC188H7C350 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCDC188H7C350 TCF3P1-201ENST00000423021 1937 ntBASIC21.42■■□□□ 1.02
CCDC188H7C350 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21.42■■□□□ 1.02
CCDC188H7C350 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCDC188H7C350 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.42■■□□□ 1.02
CCDC188H7C350 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCDC188H7C350 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CCDC188H7C350 AC126544.1-201ENST00000580842 1059 ntBASIC21.42■■□□□ 1.02
CCDC188H7C350 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC21.42■■□□□ 1.02
CCDC188H7C350 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCDC188H7C350 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CCDC188H7C350 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCDC188H7C350 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC21.41■■□□□ 1.02
CCDC188H7C350 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCDC188H7C350 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
CCDC188H7C350 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCDC188H7C350 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC21.41■■□□□ 1.02
CCDC188H7C350 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCDC188H7C350 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.41■■□□□ 1.02
CCDC188H7C350 EEF1DP3-203ENST00000566025 782 ntBASIC21.41■■□□□ 1.02
CCDC188H7C350 AC053503.5-201ENST00000601508 636 ntBASIC21.41■■□□□ 1.02
CCDC188H7C350 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.41■■□□□ 1.02
CCDC188H7C350 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCDC188H7C350 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCDC188H7C350 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC21.41■■□□□ 1.02
CCDC188H7C350 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CCDC188H7C350 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCDC188H7C350 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC21.41■■□□□ 1.02
CCDC188H7C350 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.41■■□□□ 1.02
CCDC188H7C350 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCDC188H7C350 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCDC188H7C350 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.4■■□□□ 1.02
CCDC188H7C350 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CCDC188H7C350 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC21.4■■□□□ 1.02
CCDC188H7C350 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCDC188H7C350 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CCDC188H7C350 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCDC188H7C350 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCDC188H7C350 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.4■■□□□ 1.02
CCDC188H7C350 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.4■■□□□ 1.02
CCDC188H7C350 AL356441.2-201ENST00000443009 864 ntBASIC21.4■■□□□ 1.02
CCDC188H7C350 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCDC188H7C350 AC131281.2-201ENST00000520478 145 ntBASIC21.4■■□□□ 1.02
CCDC188H7C350 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.4■■□□□ 1.02
CCDC188H7C350 MIR4767-201ENST00000582827 78 ntBASIC21.4■■□□□ 1.02
CCDC188H7C350 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCDC188H7C350 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCDC188H7C350 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCDC188H7C350 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCDC188H7C350 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
CCDC188H7C350 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCDC188H7C350 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CCDC188H7C350 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCDC188H7C350 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC21.4■■□□□ 1.02
CCDC188H7C350 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
CCDC188H7C350 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.02
CCDC188H7C350 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CCDC188H7C350 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
CCDC188H7C350 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC21.39■■□□□ 1.02
CCDC188H7C350 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CCDC188H7C350 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.39■■□□□ 1.02
CCDC188H7C350 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
CCDC188H7C350 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CCDC188H7C350 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
CCDC188H7C350 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CCDC188H7C350 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CCDC188H7C350 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
CCDC188H7C350 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.39■■□□□ 1.01
CCDC188H7C350 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
CCDC188H7C350 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CCDC188H7C350 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CCDC188H7C350 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.39■■□□□ 1.01
CCDC188H7C350 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC188H7C350 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC188H7C350 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC188H7C350 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC188H7C350 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC188H7C350 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.38■■□□□ 1.01
CCDC188H7C350 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms