Protein–RNA interactions for Protein: B2RD01

CENPBD1, CENPB DNA-binding domain-containing protein 1, humanhuman

Predictions only

Length 187 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPBD1B2RD01 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CENPBD1B2RD01 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CENPBD1B2RD01 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CENPBD1B2RD01 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CENPBD1B2RD01 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.73■□□□□ 0.59
CENPBD1B2RD01 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CENPBD1B2RD01 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CENPBD1B2RD01 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.72■□□□□ 0.59
CENPBD1B2RD01 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.72■□□□□ 0.59
CENPBD1B2RD01 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
CENPBD1B2RD01 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CENPBD1B2RD01 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CENPBD1B2RD01 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CENPBD1B2RD01 AC087289.5-201ENST00000586076 3175 ntBASIC18.72■□□□□ 0.59
CENPBD1B2RD01 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CENPBD1B2RD01 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
CENPBD1B2RD01 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.72■□□□□ 0.59
CENPBD1B2RD01 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.72■□□□□ 0.59
CENPBD1B2RD01 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC18.72■□□□□ 0.59
CENPBD1B2RD01 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CENPBD1B2RD01 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.72■□□□□ 0.59
CENPBD1B2RD01 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CENPBD1B2RD01 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.72■□□□□ 0.59
CENPBD1B2RD01 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.72■□□□□ 0.59
CENPBD1B2RD01 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CENPBD1B2RD01 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CENPBD1B2RD01 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CENPBD1B2RD01 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.71■□□□□ 0.59
CENPBD1B2RD01 LINC02228-203ENST00000641970 1355 ntBASIC18.71■□□□□ 0.59
CENPBD1B2RD01 AL049796.1-201ENST00000565336 1766 ntBASIC18.71■□□□□ 0.59
CENPBD1B2RD01 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CENPBD1B2RD01 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CENPBD1B2RD01 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CENPBD1B2RD01 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CENPBD1B2RD01 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CENPBD1B2RD01 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CENPBD1B2RD01 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CENPBD1B2RD01 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CENPBD1B2RD01 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CENPBD1B2RD01 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.71■□□□□ 0.59
CENPBD1B2RD01 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.71■□□□□ 0.59
CENPBD1B2RD01 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CENPBD1B2RD01 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.71■□□□□ 0.59
CENPBD1B2RD01 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CENPBD1B2RD01 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.71■□□□□ 0.59
CENPBD1B2RD01 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CENPBD1B2RD01 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.71■□□□□ 0.59
CENPBD1B2RD01 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.7■□□□□ 0.58
CENPBD1B2RD01 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CENPBD1B2RD01 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CENPBD1B2RD01 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.7■□□□□ 0.58
CENPBD1B2RD01 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CENPBD1B2RD01 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CENPBD1B2RD01 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CENPBD1B2RD01 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.7■□□□□ 0.58
CENPBD1B2RD01 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CENPBD1B2RD01 MIR6084-201ENST00000622012 110 ntBASIC18.7■□□□□ 0.58
CENPBD1B2RD01 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.7■□□□□ 0.58
CENPBD1B2RD01 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CENPBD1B2RD01 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
CENPBD1B2RD01 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CENPBD1B2RD01 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CENPBD1B2RD01 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CENPBD1B2RD01 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CENPBD1B2RD01 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CENPBD1B2RD01 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CENPBD1B2RD01 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CENPBD1B2RD01 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CENPBD1B2RD01 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CENPBD1B2RD01 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CENPBD1B2RD01 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CENPBD1B2RD01 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.69■□□□□ 0.58
CENPBD1B2RD01 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CENPBD1B2RD01 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CENPBD1B2RD01 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CENPBD1B2RD01 AC079140.4-201ENST00000507448 529 ntBASIC18.69■□□□□ 0.58
CENPBD1B2RD01 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CENPBD1B2RD01 KRT87P-202ENST00000534226 1464 ntBASIC18.69■□□□□ 0.58
CENPBD1B2RD01 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CENPBD1B2RD01 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CENPBD1B2RD01 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.69■□□□□ 0.58
CENPBD1B2RD01 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
CENPBD1B2RD01 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CENPBD1B2RD01 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CENPBD1B2RD01 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
CENPBD1B2RD01 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CENPBD1B2RD01 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CENPBD1B2RD01 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CENPBD1B2RD01 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CENPBD1B2RD01 JTB-203ENST00000368589 1216 ntTSL 2 BASIC18.68■□□□□ 0.58
CENPBD1B2RD01 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CENPBD1B2RD01 YBX1P1-201ENST00000445822 960 ntBASIC18.68■□□□□ 0.58
CENPBD1B2RD01 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.68■□□□□ 0.58
CENPBD1B2RD01 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CENPBD1B2RD01 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CENPBD1B2RD01 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
CENPBD1B2RD01 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CENPBD1B2RD01 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.68■□□□□ 0.58
CENPBD1B2RD01 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CENPBD1B2RD01 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms