Protein–RNA interactions for Protein: A0A0B4J277

TRAV22, T-cell receptor alpha variable 22 (Fragment), humanhuman

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV22A0A0B4J277 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TRAV22A0A0B4J277 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TRAV22A0A0B4J277 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC11.72□□□□□ -0.53
TRAV22A0A0B4J277 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TRAV22A0A0B4J277 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
TRAV22A0A0B4J277 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
TRAV22A0A0B4J277 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
TRAV22A0A0B4J277 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TRAV22A0A0B4J277 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC11.72□□□□□ -0.53
TRAV22A0A0B4J277 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TRAV22A0A0B4J277 AC092296.2-201ENST00000589470 999 ntBASIC11.72□□□□□ -0.53
TRAV22A0A0B4J277 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
TRAV22A0A0B4J277 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
TRAV22A0A0B4J277 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC11.72□□□□□ -0.53
TRAV22A0A0B4J277 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
TRAV22A0A0B4J277 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC11.72□□□□□ -0.53
TRAV22A0A0B4J277 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
TRAV22A0A0B4J277 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
TRAV22A0A0B4J277 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TRAV22A0A0B4J277 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TRAV22A0A0B4J277 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC11.71□□□□□ -0.53
TRAV22A0A0B4J277 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.53
TRAV22A0A0B4J277 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
TRAV22A0A0B4J277 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TRAV22A0A0B4J277 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TRAV22A0A0B4J277 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
TRAV22A0A0B4J277 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TRAV22A0A0B4J277 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TRAV22A0A0B4J277 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC11.71□□□□□ -0.53
TRAV22A0A0B4J277 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
TRAV22A0A0B4J277 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TRAV22A0A0B4J277 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TRAV22A0A0B4J277 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
TRAV22A0A0B4J277 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TRAV22A0A0B4J277 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
TRAV22A0A0B4J277 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
TRAV22A0A0B4J277 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
TRAV22A0A0B4J277 ECEL1P2-201ENST00000461596 1295 ntBASIC11.71□□□□□ -0.53
TRAV22A0A0B4J277 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
TRAV22A0A0B4J277 GFER-205ENST00000569451 517 ntTSL 5 BASIC11.71□□□□□ -0.53
TRAV22A0A0B4J277 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
TRAV22A0A0B4J277 RAP2CP1-202ENST00000605179 643 ntBASIC11.71□□□□□ -0.53
TRAV22A0A0B4J277 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TRAV22A0A0B4J277 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
TRAV22A0A0B4J277 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
TRAV22A0A0B4J277 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
TRAV22A0A0B4J277 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
TRAV22A0A0B4J277 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC11.71□□□□□ -0.54
TRAV22A0A0B4J277 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
TRAV22A0A0B4J277 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
TRAV22A0A0B4J277 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
TRAV22A0A0B4J277 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRAV22A0A0B4J277 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
TRAV22A0A0B4J277 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRAV22A0A0B4J277 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRAV22A0A0B4J277 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC11.7□□□□□ -0.54
TRAV22A0A0B4J277 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
TRAV22A0A0B4J277 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRAV22A0A0B4J277 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
TRAV22A0A0B4J277 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC11.7□□□□□ -0.54
TRAV22A0A0B4J277 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
TRAV22A0A0B4J277 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC11.7□□□□□ -0.54
TRAV22A0A0B4J277 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRAV22A0A0B4J277 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
TRAV22A0A0B4J277 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRAV22A0A0B4J277 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRAV22A0A0B4J277 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC11.7□□□□□ -0.54
TRAV22A0A0B4J277 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRAV22A0A0B4J277 AL032819.2-201ENST00000624543 2162 ntBASIC11.7□□□□□ -0.54
TRAV22A0A0B4J277 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRAV22A0A0B4J277 PKD1P1-201ENST00000458669 6805 ntBASIC11.7□□□□□ -0.54
TRAV22A0A0B4J277 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRAV22A0A0B4J277 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRAV22A0A0B4J277 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
TRAV22A0A0B4J277 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
TRAV22A0A0B4J277 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
TRAV22A0A0B4J277 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC11.7□□□□□ -0.54
TRAV22A0A0B4J277 RPS2P7-201ENST00000447334 885 ntBASIC11.7□□□□□ -0.54
TRAV22A0A0B4J277 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
TRAV22A0A0B4J277 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRAV22A0A0B4J277 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
TRAV22A0A0B4J277 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRAV22A0A0B4J277 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
TRAV22A0A0B4J277 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRAV22A0A0B4J277 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC11.7□□□□□ -0.54
TRAV22A0A0B4J277 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRAV22A0A0B4J277 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
TRAV22A0A0B4J277 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC11.7□□□□□ -0.54
TRAV22A0A0B4J277 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC11.7□□□□□ -0.54
TRAV22A0A0B4J277 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRAV22A0A0B4J277 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRAV22A0A0B4J277 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
TRAV22A0A0B4J277 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
TRAV22A0A0B4J277 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC11.69□□□□□ -0.54
TRAV22A0A0B4J277 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRAV22A0A0B4J277 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRAV22A0A0B4J277 HTR7P1-202ENST00000624664 4411 ntBASIC11.69□□□□□ -0.54
TRAV22A0A0B4J277 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRAV22A0A0B4J277 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRAV22A0A0B4J277 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms