Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV25A0A0B4J276 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
TRAV25A0A0B4J276 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.07
TRAV25A0A0B4J276 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV25A0A0B4J276 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV25A0A0B4J276 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
TRAV25A0A0B4J276 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV25A0A0B4J276 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV25A0A0B4J276 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV25A0A0B4J276 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV25A0A0B4J276 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC15.51■□□□□ 0.07
TRAV25A0A0B4J276 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV25A0A0B4J276 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC15.51■□□□□ 0.07
TRAV25A0A0B4J276 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV25A0A0B4J276 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV25A0A0B4J276 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC15.51■□□□□ 0.07
TRAV25A0A0B4J276 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV25A0A0B4J276 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV25A0A0B4J276 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV25A0A0B4J276 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC15.51■□□□□ 0.07
TRAV25A0A0B4J276 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV25A0A0B4J276 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC15.51■□□□□ 0.07
TRAV25A0A0B4J276 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV25A0A0B4J276 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV25A0A0B4J276 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV25A0A0B4J276 AC011484.1-201ENST00000377652 1995 ntBASIC15.51■□□□□ 0.07
TRAV25A0A0B4J276 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV25A0A0B4J276 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV25A0A0B4J276 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC15.5■□□□□ 0.07
TRAV25A0A0B4J276 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV25A0A0B4J276 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV25A0A0B4J276 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV25A0A0B4J276 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV25A0A0B4J276 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV25A0A0B4J276 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
TRAV25A0A0B4J276 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC15.5■□□□□ 0.07
TRAV25A0A0B4J276 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC15.5■□□□□ 0.07
TRAV25A0A0B4J276 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV25A0A0B4J276 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV25A0A0B4J276 FEM1AP4-201ENST00000443167 1987 ntBASIC15.5■□□□□ 0.07
TRAV25A0A0B4J276 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV25A0A0B4J276 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
TRAV25A0A0B4J276 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC15.5■□□□□ 0.07
TRAV25A0A0B4J276 PGM5P4-201ENST00000421970 445 ntBASIC15.5■□□□□ 0.07
TRAV25A0A0B4J276 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC15.5■□□□□ 0.07
TRAV25A0A0B4J276 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC15.5■□□□□ 0.07
TRAV25A0A0B4J276 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV25A0A0B4J276 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
TRAV25A0A0B4J276 AC083906.2-201ENST00000511578 360 ntBASIC15.5■□□□□ 0.07
TRAV25A0A0B4J276 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV25A0A0B4J276 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC15.5■□□□□ 0.07
TRAV25A0A0B4J276 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC15.5■□□□□ 0.07
TRAV25A0A0B4J276 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC15.5■□□□□ 0.07
TRAV25A0A0B4J276 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV25A0A0B4J276 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV25A0A0B4J276 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV25A0A0B4J276 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV25A0A0B4J276 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC15.49■□□□□ 0.07
TRAV25A0A0B4J276 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC15.49■□□□□ 0.07
TRAV25A0A0B4J276 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV25A0A0B4J276 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
TRAV25A0A0B4J276 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV25A0A0B4J276 WWC2-AS2-201ENST00000578387 2183 ntBASIC15.49■□□□□ 0.07
TRAV25A0A0B4J276 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
TRAV25A0A0B4J276 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV25A0A0B4J276 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC15.49■□□□□ 0.07
TRAV25A0A0B4J276 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV25A0A0B4J276 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV25A0A0B4J276 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV25A0A0B4J276 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV25A0A0B4J276 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV25A0A0B4J276 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV25A0A0B4J276 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV25A0A0B4J276 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV25A0A0B4J276 SLC29A4P1-201ENST00000398760 971 ntBASIC15.49■□□□□ 0.07
TRAV25A0A0B4J276 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV25A0A0B4J276 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC15.49■□□□□ 0.07
TRAV25A0A0B4J276 AC105036.2-201ENST00000569468 176 ntBASIC15.49■□□□□ 0.07
TRAV25A0A0B4J276 AC016405.3-201ENST00000607710 860 ntBASIC15.49■□□□□ 0.07
TRAV25A0A0B4J276 AL050303.2-201ENST00000619798 666 ntBASIC15.49■□□□□ 0.07
TRAV25A0A0B4J276 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV25A0A0B4J276 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC15.49■□□□□ 0.07
TRAV25A0A0B4J276 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
TRAV25A0A0B4J276 PALM-207ENST00000590161 2137 ntTSL 4 BASIC15.49■□□□□ 0.07
TRAV25A0A0B4J276 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
TRAV25A0A0B4J276 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV25A0A0B4J276 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
TRAV25A0A0B4J276 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
TRAV25A0A0B4J276 AL024507.2-201ENST00000606070 2574 ntBASIC15.48■□□□□ 0.07
TRAV25A0A0B4J276 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC15.48■□□□□ 0.07
TRAV25A0A0B4J276 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
TRAV25A0A0B4J276 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV25A0A0B4J276 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC15.48■□□□□ 0.07
TRAV25A0A0B4J276 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
TRAV25A0A0B4J276 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
TRAV25A0A0B4J276 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV25A0A0B4J276 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV25A0A0B4J276 VMO1-204ENST00000441199 741 ntTSL 2 BASIC15.48■□□□□ 0.07
TRAV25A0A0B4J276 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC15.48■□□□□ 0.07
TRAV25A0A0B4J276 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms