Protein–RNA interactions for Protein: A0A0B4J237

TRAV8-2, T-cell receptor alpha variable 8-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-2A0A0B4J237 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TRAV8-2A0A0B4J237 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV8-2A0A0B4J237 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TRAV8-2A0A0B4J237 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV8-2A0A0B4J237 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC15.65■□□□□ 0.1
TRAV8-2A0A0B4J237 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV8-2A0A0B4J237 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
TRAV8-2A0A0B4J237 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TRAV8-2A0A0B4J237 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV8-2A0A0B4J237 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV8-2A0A0B4J237 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC15.64■□□□□ 0.09
TRAV8-2A0A0B4J237 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV8-2A0A0B4J237 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV8-2A0A0B4J237 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV8-2A0A0B4J237 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV8-2A0A0B4J237 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV8-2A0A0B4J237 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV8-2A0A0B4J237 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV8-2A0A0B4J237 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV8-2A0A0B4J237 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC15.64■□□□□ 0.09
TRAV8-2A0A0B4J237 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
TRAV8-2A0A0B4J237 IRS3P-201ENST00000223076 1006 ntBASIC15.64■□□□□ 0.09
TRAV8-2A0A0B4J237 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV8-2A0A0B4J237 AC105265.2-201ENST00000467189 838 ntBASIC15.64■□□□□ 0.09
TRAV8-2A0A0B4J237 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV8-2A0A0B4J237 AC079140.4-201ENST00000507448 529 ntBASIC15.64■□□□□ 0.09
TRAV8-2A0A0B4J237 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC15.64■□□□□ 0.09
TRAV8-2A0A0B4J237 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC15.64■□□□□ 0.09
TRAV8-2A0A0B4J237 KRT87P-202ENST00000534226 1464 ntBASIC15.64■□□□□ 0.09
TRAV8-2A0A0B4J237 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC15.64■□□□□ 0.09
TRAV8-2A0A0B4J237 AC007225.1-201ENST00000566331 1836 ntBASIC15.64■□□□□ 0.09
TRAV8-2A0A0B4J237 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC15.63■□□□□ 0.09
TRAV8-2A0A0B4J237 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV8-2A0A0B4J237 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV8-2A0A0B4J237 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV8-2A0A0B4J237 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC15.63■□□□□ 0.09
TRAV8-2A0A0B4J237 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV8-2A0A0B4J237 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV8-2A0A0B4J237 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV8-2A0A0B4J237 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV8-2A0A0B4J237 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
TRAV8-2A0A0B4J237 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC15.63■□□□□ 0.09
TRAV8-2A0A0B4J237 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC15.63■□□□□ 0.09
TRAV8-2A0A0B4J237 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV8-2A0A0B4J237 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
TRAV8-2A0A0B4J237 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC15.63■□□□□ 0.09
TRAV8-2A0A0B4J237 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV8-2A0A0B4J237 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV8-2A0A0B4J237 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV8-2A0A0B4J237 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV8-2A0A0B4J237 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV8-2A0A0B4J237 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC15.63■□□□□ 0.09
TRAV8-2A0A0B4J237 AC027702.1-201ENST00000563810 1770 ntBASIC15.62■□□□□ 0.09
TRAV8-2A0A0B4J237 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC15.62■□□□□ 0.09
TRAV8-2A0A0B4J237 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV8-2A0A0B4J237 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV8-2A0A0B4J237 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV8-2A0A0B4J237 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV8-2A0A0B4J237 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV8-2A0A0B4J237 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
TRAV8-2A0A0B4J237 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV8-2A0A0B4J237 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV8-2A0A0B4J237 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC15.62■□□□□ 0.09
TRAV8-2A0A0B4J237 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC15.62■□□□□ 0.09
TRAV8-2A0A0B4J237 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
TRAV8-2A0A0B4J237 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV8-2A0A0B4J237 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV8-2A0A0B4J237 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV8-2A0A0B4J237 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV8-2A0A0B4J237 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV8-2A0A0B4J237 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
TRAV8-2A0A0B4J237 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV8-2A0A0B4J237 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV8-2A0A0B4J237 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV8-2A0A0B4J237 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV8-2A0A0B4J237 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV8-2A0A0B4J237 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
TRAV8-2A0A0B4J237 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC15.61■□□□□ 0.09
TRAV8-2A0A0B4J237 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV8-2A0A0B4J237 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC15.61■□□□□ 0.09
TRAV8-2A0A0B4J237 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV8-2A0A0B4J237 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
TRAV8-2A0A0B4J237 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
TRAV8-2A0A0B4J237 POU5F1P4-201ENST00000413175 1085 ntBASIC15.61■□□□□ 0.09
TRAV8-2A0A0B4J237 AC027612.3-201ENST00000413684 1047 ntBASIC15.61■□□□□ 0.09
TRAV8-2A0A0B4J237 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC15.61■□□□□ 0.09
TRAV8-2A0A0B4J237 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV8-2A0A0B4J237 SERP1-208ENST00000491660 830 ntTSL 2 BASIC15.61■□□□□ 0.09
TRAV8-2A0A0B4J237 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC15.61■□□□□ 0.09
TRAV8-2A0A0B4J237 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV8-2A0A0B4J237 AC008175.2-201ENST00000612840 297 ntBASIC15.61■□□□□ 0.09
TRAV8-2A0A0B4J237 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV8-2A0A0B4J237 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC15.61■□□□□ 0.09
TRAV8-2A0A0B4J237 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV8-2A0A0B4J237 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC15.61■□□□□ 0.09
TRAV8-2A0A0B4J237 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC15.61■□□□□ 0.09
TRAV8-2A0A0B4J237 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
TRAV8-2A0A0B4J237 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
TRAV8-2A0A0B4J237 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV8-2A0A0B4J237 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms