Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC16.17■□□□□ 0.18
TRAV30A0A087WSZ9 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV30A0A087WSZ9 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC16.17■□□□□ 0.18
TRAV30A0A087WSZ9 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV30A0A087WSZ9 FEM1AP1-201ENST00000431297 1995 ntBASIC16.17■□□□□ 0.18
TRAV30A0A087WSZ9 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV30A0A087WSZ9 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV30A0A087WSZ9 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV30A0A087WSZ9 AC142381.2-201ENST00000566120 298 ntBASIC16.17■□□□□ 0.18
TRAV30A0A087WSZ9 TPRG1LP1-201ENST00000598702 760 ntBASIC16.17■□□□□ 0.18
TRAV30A0A087WSZ9 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV30A0A087WSZ9 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV30A0A087WSZ9 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
TRAV30A0A087WSZ9 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV30A0A087WSZ9 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV30A0A087WSZ9 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC16.17■□□□□ 0.18
TRAV30A0A087WSZ9 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV30A0A087WSZ9 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
TRAV30A0A087WSZ9 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV30A0A087WSZ9 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV30A0A087WSZ9 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV30A0A087WSZ9 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC16.17■□□□□ 0.18
TRAV30A0A087WSZ9 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
TRAV30A0A087WSZ9 PLK5-205ENST00000642079 1969 ntBASIC16.17■□□□□ 0.18
TRAV30A0A087WSZ9 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC16.16■□□□□ 0.18
TRAV30A0A087WSZ9 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV30A0A087WSZ9 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV30A0A087WSZ9 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
TRAV30A0A087WSZ9 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC16.16■□□□□ 0.18
TRAV30A0A087WSZ9 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV30A0A087WSZ9 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV30A0A087WSZ9 MCC-208ENST00000514701 2855 ntTSL 2 BASIC16.16■□□□□ 0.18
TRAV30A0A087WSZ9 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
TRAV30A0A087WSZ9 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV30A0A087WSZ9 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV30A0A087WSZ9 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC16.16■□□□□ 0.18
TRAV30A0A087WSZ9 AC120498.10-201ENST00000621827 505 ntBASIC16.16■□□□□ 0.18
TRAV30A0A087WSZ9 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV30A0A087WSZ9 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV30A0A087WSZ9 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV30A0A087WSZ9 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
TRAV30A0A087WSZ9 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV30A0A087WSZ9 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV30A0A087WSZ9 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV30A0A087WSZ9 ME2-216ENST00000639850 2331 ntTSL 5 BASIC16.16■□□□□ 0.18
TRAV30A0A087WSZ9 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV30A0A087WSZ9 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
TRAV30A0A087WSZ9 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV30A0A087WSZ9 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV30A0A087WSZ9 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
TRAV30A0A087WSZ9 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
TRAV30A0A087WSZ9 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV30A0A087WSZ9 AC079140.4-201ENST00000507448 529 ntBASIC16.15■□□□□ 0.18
TRAV30A0A087WSZ9 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV30A0A087WSZ9 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV30A0A087WSZ9 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC16.15■□□□□ 0.18
TRAV30A0A087WSZ9 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
TRAV30A0A087WSZ9 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC16.15■□□□□ 0.18
TRAV30A0A087WSZ9 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC16.15■□□□□ 0.18
TRAV30A0A087WSZ9 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV30A0A087WSZ9 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
TRAV30A0A087WSZ9 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
TRAV30A0A087WSZ9 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV30A0A087WSZ9 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV30A0A087WSZ9 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV30A0A087WSZ9 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV30A0A087WSZ9 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC16.14■□□□□ 0.17
TRAV30A0A087WSZ9 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV30A0A087WSZ9 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV30A0A087WSZ9 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV30A0A087WSZ9 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC16.14■□□□□ 0.17
TRAV30A0A087WSZ9 IRS3P-201ENST00000223076 1006 ntBASIC16.14■□□□□ 0.17
TRAV30A0A087WSZ9 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV30A0A087WSZ9 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
TRAV30A0A087WSZ9 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV30A0A087WSZ9 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC16.14■□□□□ 0.17
TRAV30A0A087WSZ9 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV30A0A087WSZ9 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV30A0A087WSZ9 KRT87P-202ENST00000534226 1464 ntBASIC16.14■□□□□ 0.17
TRAV30A0A087WSZ9 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.14■□□□□ 0.17
TRAV30A0A087WSZ9 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
TRAV30A0A087WSZ9 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
TRAV30A0A087WSZ9 GABARAPL3-202ENST00000624044 1851 ntBASIC16.14■□□□□ 0.17
TRAV30A0A087WSZ9 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV30A0A087WSZ9 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV30A0A087WSZ9 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC16.14■□□□□ 0.17
TRAV30A0A087WSZ9 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV30A0A087WSZ9 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV30A0A087WSZ9 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC16.14■□□□□ 0.17
TRAV30A0A087WSZ9 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
TRAV30A0A087WSZ9 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
TRAV30A0A087WSZ9 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
TRAV30A0A087WSZ9 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV30A0A087WSZ9 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV30A0A087WSZ9 RHOF-204ENST00000537265 699 ntTSL 2 BASIC16.13■□□□□ 0.17
TRAV30A0A087WSZ9 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC16.13■□□□□ 0.17
TRAV30A0A087WSZ9 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC16.13■□□□□ 0.17
TRAV30A0A087WSZ9 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV30A0A087WSZ9 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV30A0A087WSZ9 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms