Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 LINC02548-201ENST00000531749 484 ntTSL 3 BASIC8.85□□□□□ -0.99
NPIPA3F8WFD2 AC108134.2-201ENST00000570843 748 ntBASIC8.85□□□□□ -0.99
NPIPA3F8WFD2 ACAP1-209ENST00000575415 317 ntTSL 2 BASIC8.85□□□□□ -0.99
NPIPA3F8WFD2 LINC01892-202ENST00000583985 540 ntTSL 4 BASIC8.85□□□□□ -0.99
NPIPA3F8WFD2 TREM1-204ENST00000589614 772 ntAPPRIS ALT2 TSL 2 BASIC8.85□□□□□ -0.99
NPIPA3F8WFD2 FXYD5-211ENST00000590686 862 ntAPPRIS P2 TSL 3 BASIC8.85□□□□□ -0.99
NPIPA3F8WFD2 LINC00266-4P-202ENST00000611754 723 ntTSL 5 BASIC8.85□□□□□ -0.99
NPIPA3F8WFD2 AL391095.3-201ENST00000621084 720 ntBASIC8.85□□□□□ -0.99
NPIPA3F8WFD2 AC127381.3-201ENST00000622901 303 ntBASIC8.85□□□□□ -0.99
NPIPA3F8WFD2 NUP62-202ENST00000422090 3479 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
NPIPA3F8WFD2 AC136944.2-201ENST00000568752 3971 ntBASIC8.85□□□□□ -0.99
NPIPA3F8WFD2 ARFIP1-201ENST00000353617 3111 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
NPIPA3F8WFD2 MFSD14B-202ENST00000428393 2275 ntTSL 5 BASIC8.85□□□□□ -0.99
NPIPA3F8WFD2 FAAP24-202ENST00000588258 2298 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
NPIPA3F8WFD2 LINC00339-210ENST00000635675 1404 ntTSL 5 BASIC8.85□□□□□ -0.99
NPIPA3F8WFD2 CDH18-202ENST00000382275 3087 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
NPIPA3F8WFD2 RAB21-201ENST00000261263 15546 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
NPIPA3F8WFD2 AP3B2-215ENST00000620652 3729 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
NPIPA3F8WFD2 CACNA2D4-222ENST00000587995 3883 ntTSL 5 BASIC8.85□□□□□ -0.99
NPIPA3F8WFD2 LMX1A-201ENST00000294816 3350 ntAPPRIS P1 TSL 2 BASIC8.85□□□□□ -0.99
NPIPA3F8WFD2 ZNF791-202ENST00000446165 6412 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
NPIPA3F8WFD2 EEF1A1P6-201ENST00000434005 1384 ntBASIC8.85□□□□□ -0.99
NPIPA3F8WFD2 NFYC-201ENST00000308733 2158 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
NPIPA3F8WFD2 C1QTNF7-205ENST00000444304 1533 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
NPIPA3F8WFD2 POC5-211ENST00000510798 1524 ntTSL 2 BASIC8.85□□□□□ -0.99
NPIPA3F8WFD2 LINC01806-202ENST00000439050 2333 ntTSL 2 BASIC8.85□□□□□ -0.99
NPIPA3F8WFD2 PSMD2-206ENST00000439383 2633 ntTSL 2 BASIC8.84□□□□□ -0.99
NPIPA3F8WFD2 CYFIP1-203ENST00000610365 4515 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
NPIPA3F8WFD2 NCALD-212ENST00000519508 1805 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
NPIPA3F8WFD2 ANTXRLP1-201ENST00000604933 1829 ntBASIC8.84□□□□□ -0.99
NPIPA3F8WFD2 ACSBG2-205ENST00000588304 2759 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
NPIPA3F8WFD2 DDX39B-202ENST00000396172 2133 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
NPIPA3F8WFD2 CHRNA9-201ENST00000310169 2276 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
NPIPA3F8WFD2 IGSF3-201ENST00000318837 3842 ntAPPRIS P4 TSL 2 BASIC8.84□□□□□ -0.99
NPIPA3F8WFD2 PDHA2-201ENST00000295266 1456 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
NPIPA3F8WFD2 SORBS2-231ENST00000449407 3049 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
NPIPA3F8WFD2 SELENOT-207ENST00000615547 3488 ntTSL 5 BASIC8.84□□□□□ -0.99
NPIPA3F8WFD2 SERPINB11-201ENST00000382749 1918 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
NPIPA3F8WFD2 SLC12A3-205ENST00000566786 3119 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
NPIPA3F8WFD2 SPATA13-201ENST00000343003 6405 ntAPPRIS ALT2 TSL 2 BASIC8.84□□□□□ -0.99
NPIPA3F8WFD2 BMP15-201ENST00000252677 1179 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
NPIPA3F8WFD2 ZNRF3-AS1-201ENST00000325660 2170 ntTSL 2 BASIC8.84□□□□□ -0.99
NPIPA3F8WFD2 GH2-201ENST00000332800 1138 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
NPIPA3F8WFD2 RPS21-201ENST00000343986 344 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
NPIPA3F8WFD2 ANXA10-201ENST00000359299 1417 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
NPIPA3F8WFD2 AMMECR1-202ENST00000372057 3380 ntAPPRIS ALT2 TSL 2 BASIC8.84□□□□□ -0.99
NPIPA3F8WFD2 RNU1-67P-201ENST00000384446 164 ntBASIC8.84□□□□□ -0.99
NPIPA3F8WFD2 CHODL-205ENST00000400131 2036 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
NPIPA3F8WFD2 BPI-202ENST00000417318 1082 ntTSL 5 BASIC8.84□□□□□ -0.99
NPIPA3F8WFD2 AC078883.3-202ENST00000417539 754 ntTSL 3 BASIC8.84□□□□□ -0.99
NPIPA3F8WFD2 AC245036.3-201ENST00000429259 146 ntBASIC8.84□□□□□ -0.99
NPIPA3F8WFD2 AC004448.3-201ENST00000435953 543 ntTSL 2 BASIC8.84□□□□□ -0.99
NPIPA3F8WFD2 AC009365.1-201ENST00000436379 751 ntTSL 2 BASIC8.84□□□□□ -0.99
NPIPA3F8WFD2 AC013474.1-201ENST00000440018 799 ntBASIC8.84□□□□□ -0.99
NPIPA3F8WFD2 AL772155.3-201ENST00000444097 578 ntBASIC8.84□□□□□ -0.99
NPIPA3F8WFD2 AL662890.2-201ENST00000457253 709 ntTSL 3 BASIC8.84□□□□□ -0.99
NPIPA3F8WFD2 RN7SL120P-201ENST00000463924 296 ntBASIC8.84□□□□□ -0.99
NPIPA3F8WFD2 GCNT1P2-201ENST00000504682 595 ntBASIC8.84□□□□□ -0.99
NPIPA3F8WFD2 AC117529.1-201ENST00000505789 2023 ntBASIC8.84□□□□□ -0.99
NPIPA3F8WFD2 AC026117.1-201ENST00000509658 883 ntBASIC8.84□□□□□ -0.99
NPIPA3F8WFD2 AC008467.1-201ENST00000512693 5471 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
NPIPA3F8WFD2 RNU2-24P-201ENST00000516830 143 ntBASIC8.84□□□□□ -0.99
NPIPA3F8WFD2 LYRM2-204ENST00000520441 791 ntTSL 3 BASIC8.84□□□□□ -0.99
NPIPA3F8WFD2 AP001453.2-202ENST00000538355 431 ntTSL 2 BASIC8.84□□□□□ -0.99
NPIPA3F8WFD2 ARPP19-212ENST00000569281 661 ntAPPRIS P1 TSL 4 BASIC8.84□□□□□ -0.99
NPIPA3F8WFD2 CEACAM8-202ENST00000599005 544 ntTSL 5 BASIC8.84□□□□□ -0.99
NPIPA3F8WFD2 AC008687.3-201ENST00000599209 598 ntBASIC8.84□□□□□ -0.99
NPIPA3F8WFD2 AC111188.3-201ENST00000604663 307 ntBASIC8.84□□□□□ -0.99
NPIPA3F8WFD2 FBXW7-212ENST00000604872 970 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
NPIPA3F8WFD2 AC006058.2-201ENST00000605537 548 ntBASIC8.84□□□□□ -0.99
NPIPA3F8WFD2 CCL4L2-213ENST00000617405 846 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
NPIPA3F8WFD2 SOX2-OT-244ENST00000627738 692 ntTSL 5 BASIC8.84□□□□□ -0.99
NPIPA3F8WFD2 AC073869.5-201ENST00000635979 465 ntTSL 5 BASIC8.84□□□□□ -0.99
NPIPA3F8WFD2 GOLGA6A-201ENST00000290438 3176 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
NPIPA3F8WFD2 PPFIA2-216ENST00000549396 5363 ntAPPRIS P4 TSL 1 (best) BASIC8.84□□□□□ -0.99
NPIPA3F8WFD2 LRRC4C-207ENST00000619527 2286 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
NPIPA3F8WFD2 AC108120.3-201ENST00000505953 1510 ntBASIC8.84□□□□□ -0.99
NPIPA3F8WFD2 PINK1-AS-201ENST00000451424 4443 ntTSL 2 BASIC8.84□□□□□ -0.99
NPIPA3F8WFD2 KLHL3-209ENST00000508657 6981 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
NPIPA3F8WFD2 ZNF613-202ENST00000391794 2225 ntTSL 2 BASIC8.84□□□□□ -0.99
NPIPA3F8WFD2 FAM173B-201ENST00000280330 1928 ntTSL 2 BASIC8.84□□□□□ -1
NPIPA3F8WFD2 SEMA6A-212ENST00000513137 3640 ntTSL 2 BASIC8.84□□□□□ -1
NPIPA3F8WFD2 NIPSNAP3B-201ENST00000374762 1752 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -1
NPIPA3F8WFD2 CCDC136-201ENST00000297788 4169 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
NPIPA3F8WFD2 SPO11-202ENST00000371260 1608 ntAPPRIS ALT1 TSL 5 BASIC8.83□□□□□ -1
NPIPA3F8WFD2 SEPT10-205ENST00000415095 1605 ntTSL 5 BASIC8.83□□□□□ -1
NPIPA3F8WFD2 IQSEC2-201ENST00000375365 4004 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
NPIPA3F8WFD2 BUD13P1-201ENST00000603676 1489 ntBASIC8.83□□□□□ -1
NPIPA3F8WFD2 MYBPC2-201ENST00000357701 3593 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
NPIPA3F8WFD2 CSTF1-201ENST00000217109 4290 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
NPIPA3F8WFD2 ACTA2-201ENST00000224784 1349 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
NPIPA3F8WFD2 TMPPE-201ENST00000342462 3962 ntAPPRIS P3 TSL 2 BASIC8.83□□□□□ -1
NPIPA3F8WFD2 SMC4-210ENST00000469762 3998 ntTSL 2 BASIC8.83□□□□□ -1
NPIPA3F8WFD2 SEMA5A-201ENST00000382496 11762 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
NPIPA3F8WFD2 CD207-201ENST00000410009 1869 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
NPIPA3F8WFD2 LRTOMT-222ENST00000615940 1895 ntTSL 5 BASIC8.83□□□□□ -1
NPIPA3F8WFD2 SLC17A8-202ENST00000392989 1737 ntTSL 1 (best) BASIC8.83□□□□□ -1
NPIPA3F8WFD2 CES5A-206ENST00000521992 2258 ntAPPRIS ALT2 TSL 2 BASIC8.83□□□□□ -1
NPIPA3F8WFD2 NAMA-204ENST00000604258 2133 ntTSL 1 (best) BASIC8.83□□□□□ -1
NPIPA3F8WFD2 SPDYE16-202ENST00000632547 3434 ntAPPRIS P5 TSL 5 BASIC8.83□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 331.5 ms