RNA–Protein interactions for RNA: ENST00000343003.10

SPATA13-201, Transcript of spermatogenesis associated 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPATA13, Length 6,405 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPATA13-201ENST00000343003 DCAF8L2P0C7V8 631 aa16.05■□□□□ 0.16
SPATA13-201ENST00000343003 NISCHQ9Y2I1 1504 aa15.71■□□□□ 0.11
SPATA13-201ENST00000343003 SUPT5HO00267 1087 aaKnown RBP15.2■□□□□ 0.02
SPATA13-201ENST00000343003 SHROOM4Q9ULL8 1493 aa15.03■□□□□ -0
SPATA13-201ENST00000343003 EHMT2Q96KQ7 1210 aa14.64□□□□□ -0.07
SPATA13-201ENST00000343003 APLP2Q06481 763 aa14.55□□□□□ -0.08
SPATA13-201ENST00000343003 FAM9AQ8IZU1 332 aaPredicted RBP14.41□□□□□ -0.1
SPATA13-201ENST00000343003 PELP1Q8IZL8 1130 aaKnown RBP14.38□□□□□ -0.11
SPATA13-201ENST00000343003 TRIM41Q8WV44 630 aa14.17□□□□□ -0.14
SPATA13-201ENST00000343003 TTBK1Q5TCY1 1321 aaPredicted RBP14.16□□□□□ -0.14
SPATA13-201ENST00000343003 PCGF6Q9BYE7 350 aa14.1□□□□□ -0.15
SPATA13-201ENST00000343003 RANGAP1P46060 587 aaPredicted RBP14.07□□□□□ -0.16
SPATA13-201ENST00000343003 ZEB1P37275 1124 aaPredicted RBP14.04□□□□□ -0.16
SPATA13-201ENST00000343003 ATP1B4Q9UN42 357 aaPredicted RBP14.01□□□□□ -0.17
SPATA13-201ENST00000343003 UBTFP17480 764 aaKnown RBP13.99□□□□□ -0.17
SPATA13-201ENST00000343003 CCER1Q8TC90 406 aaPredicted RBP13.95□□□□□ -0.18
SPATA13-201ENST00000343003 CENPBP07199 599 aaPredicted RBP13.88□□□□□ -0.19
SPATA13-201ENST00000343003 ERICH6Q7L0X2 663 aa13.73□□□□□ -0.21
SPATA13-201ENST00000343003 TRIM26Q12899 539 aaPredicted RBP13.64□□□□□ -0.23
SPATA13-201ENST00000343003 NEFLP07196 543 aa13.63□□□□□ -0.23
SPATA13-201ENST00000343003 PPARGC1BQ86YN6 1023 aaKnown RBP13.61□□□□□ -0.23
SPATA13-201ENST00000343003 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.55□□□□□ -0.24
SPATA13-201ENST00000343003 HNRNPUL2Q1KMD3 747 aaKnown RBP13.55□□□□□ -0.24
SPATA13-201ENST00000343003 YTHDC1Q96MU7 727 aaKnown RBP13.53□□□□□ -0.24
SPATA13-201ENST00000343003 MYT1LQ9UL68 1186 aa13.51□□□□□ -0.25
SPATA13-201ENST00000343003 ABCC9O60706 1549 aa13.5□□□□□ -0.25
SPATA13-201ENST00000343003 CHIC1Q5VXU3 224 aa13.49□□□□□ -0.25
SPATA13-201ENST00000343003 ITGAEP38570 1179 aa13.48□□□□□ -0.25
SPATA13-201ENST00000343003 LOC105371045A0A1W2PR82 267 aa13.43□□□□□ -0.26
SPATA13-201ENST00000343003 HRCP23327 699 aa13.37□□□□□ -0.27
SPATA13-201ENST00000343003 POLR3GLQ9BT43 218 aa13.36□□□□□ -0.27
SPATA13-201ENST00000343003 PABPN1Q86U42 306 aaKnown RBP eCLIP13.36□□□□□ -0.27
SPATA13-201ENST00000343003 FAM50AQ14320 339 aaKnown RBP13.23□□□□□ -0.29
SPATA13-201ENST00000343003 DAXXQ9UER7 740 aaPredicted RBP13.22□□□□□ -0.29
SPATA13-201ENST00000343003 MYT1Q01538 1121 aa13.21□□□□□ -0.29
SPATA13-201ENST00000343003 SLC4A1APQ9BWU0 796 aaKnown RBP13.16□□□□□ -0.3
SPATA13-201ENST00000343003 TRIM52Q96A61 297 aa13.15□□□□□ -0.3
SPATA13-201ENST00000343003 CNGB1Q14028 1251 aaPredicted RBP13.14□□□□□ -0.31
SPATA13-201ENST00000343003 DIEXFQ68CQ4 756 aaKnown RBP13.08□□□□□ -0.32
SPATA13-201ENST00000343003 SCRIBQ14160 1630 aa13.08□□□□□ -0.32
SPATA13-201ENST00000343003 CCDC180Q9P1Z9 1646 aa13.06□□□□□ -0.32
SPATA13-201ENST00000343003 NEUROD1Q13562 356 aa13.05□□□□□ -0.32
SPATA13-201ENST00000343003 FBLN2P98095 1184 aa13.04□□□□□ -0.32
SPATA13-201ENST00000343003 ZCCHC6Q5VYS8 1495 aaKnown RBP13.02□□□□□ -0.33
SPATA13-201ENST00000343003 CSRNP3Q8WYN3 585 aa12.96□□□□□ -0.34
SPATA13-201ENST00000343003 CLSPNQ9HAW4 1339 aa12.94□□□□□ -0.34
SPATA13-201ENST00000343003 ANP32CO43423 234 aa12.94□□□□□ -0.34
SPATA13-201ENST00000343003 ZNF326Q5BKZ1 582 aaKnown RBP12.93□□□□□ -0.34
SPATA13-201ENST00000343003 ZNF316A6NFI3 1004 aaPredicted RBP12.93□□□□□ -0.34
SPATA13-201ENST00000343003 P3H3Q8IVL6 736 aa12.9□□□□□ -0.34
SPATA13-201ENST00000343003 CDK11AQ9UQ88 783 aaPredicted RBP12.87□□□□□ -0.35
SPATA13-201ENST00000343003 RTL5Q5HYW3 569 aaPredicted RBP12.84□□□□□ -0.35
SPATA13-201ENST00000343003 ARID3CA6NKF2 412 aa12.83□□□□□ -0.36
SPATA13-201ENST00000343003 ZNF777Q9ULD5 760 aaPredicted RBP12.81□□□□□ -0.36
SPATA13-201ENST00000343003 RB1CC1Q8TDY2 1594 aa12.81□□□□□ -0.36
SPATA13-201ENST00000343003 ZBTB47Q9UFB7 747 aaPredicted RBP12.79□□□□□ -0.36
SPATA13-201ENST00000343003 BCANQ96GW7 911 aa12.78□□□□□ -0.36
SPATA13-201ENST00000343003 NEFMP07197 916 aa12.76□□□□□ -0.37
SPATA13-201ENST00000343003 CANXP27824 592 aaKnown RBP12.74□□□□□ -0.37
SPATA13-201ENST00000343003 DCAF1Q9Y4B6 1507 aa12.73□□□□□ -0.37
SPATA13-201ENST00000343003 GTF3C3Q9Y5Q9 886 aa12.7□□□□□ -0.38
SPATA13-201ENST00000343003 TONSLQ96HA7 1378 aa12.69□□□□□ -0.38
SPATA13-201ENST00000343003 ESF1Q9H501 851 aaKnown RBP12.69□□□□□ -0.38
SPATA13-201ENST00000343003 SLC24A1O60721 1099 aa12.68□□□□□ -0.38
SPATA13-201ENST00000343003 NPM1P06748 294 aaKnown RBP eCLIP12.67□□□□□ -0.38
SPATA13-201ENST00000343003 NACADO15069 1562 aa12.66□□□□□ -0.38
SPATA13-201ENST00000343003 STAG3Q9UJ98 1225 aa12.62□□□□□ -0.39
SPATA13-201ENST00000343003 CHGAP10645 457 aaKnown RBP12.6□□□□□ -0.39
SPATA13-201ENST00000343003 MTUS2Q5JR59 1369 aa12.57□□□□□ -0.4
SPATA13-201ENST00000343003 EEA1Q15075 1411 aa12.57□□□□□ -0.4
SPATA13-201ENST00000343003 ACIN1Q9UKV3 1341 aaKnown RBP12.56□□□□□ -0.4
SPATA13-201ENST00000343003 CHMP7Q8WUX9 453 aaPredicted RBP12.56□□□□□ -0.4
SPATA13-201ENST00000343003 CLIP1P30622 1438 aa12.56□□□□□ -0.4
SPATA13-201ENST00000343003 GOLGA3Q08378 1498 aa12.55□□□□□ -0.4
SPATA13-201ENST00000343003 BAZ1BQ9UIG0 1483 aaKnown RBP12.54□□□□□ -0.4
SPATA13-201ENST00000343003 CHIC2Q9UKJ5 165 aa12.54□□□□□ -0.4
SPATA13-201ENST00000343003 BCL11AQ9H165 835 aa12.53□□□□□ -0.4
SPATA13-201ENST00000343003 TSPY4P0CV99 314 aa12.53□□□□□ -0.4
SPATA13-201ENST00000343003 TSPY10P0CW01 314 aa12.53□□□□□ -0.4
SPATA13-201ENST00000343003 ANP32AP39687 249 aaKnown RBP12.53□□□□□ -0.4
SPATA13-201ENST00000343003 RSF1Q96T23 1441 aaPredicted RBP12.52□□□□□ -0.4
SPATA13-201ENST00000343003 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.52□□□□□ -0.4
SPATA13-201ENST00000343003 DDX10Q13206 875 aaKnown RBP12.47□□□□□ -0.41
SPATA13-201ENST00000343003 WRNQ14191 1432 aaPredicted RBP eCLIP12.47□□□□□ -0.41
SPATA13-201ENST00000343003 HNRNPUQ00839 825 aaKnown RBP eCLIP12.46□□□□□ -0.41
SPATA13-201ENST00000343003 PLPPR3Q6T4P5 718 aa12.46□□□□□ -0.42
SPATA13-201ENST00000343003 FAM9BQ8IZU0 186 aa12.45□□□□□ -0.42
SPATA13-201ENST00000343003 CEP162Q5TB80 1403 aa12.44□□□□□ -0.42
SPATA13-201ENST00000343003 KIF27Q86VH2 1401 aa12.44□□□□□ -0.42
SPATA13-201ENST00000343003 FKBP8Q14318 412 aa12.43□□□□□ -0.42
SPATA13-201ENST00000343003 BAZ1AQ9NRL2 1556 aaPredicted RBP12.43□□□□□ -0.42
SPATA13-201ENST00000343003 TMC1Q8TDI8 760 aa12.42□□□□□ -0.42
SPATA13-201ENST00000343003 WDR43Q15061 677 aaKnown RBP eCLIP12.42□□□□□ -0.42
SPATA13-201ENST00000343003 CEP164Q9UPV0 1460 aa12.42□□□□□ -0.42
SPATA13-201ENST00000343003 NPM2Q86SE8 214 aaKnown RBP12.41□□□□□ -0.42
SPATA13-201ENST00000343003 KDM2AQ9Y2K7 1162 aa12.41□□□□□ -0.42
SPATA13-201ENST00000343003 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.41□□□□□ -0.42
SPATA13-201ENST00000343003 UPF2Q9HAU5 1272 aaKnown RBP12.39□□□□□ -0.43
SPATA13-201ENST00000343003 PLEKHD1A6NEE1 506 aa12.39□□□□□ -0.43
SPATA13-201ENST00000343003 RRP7BPQ9NSQ0 103 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms