RNA–Protein interactions for RNA: ENST00000627738.1

SOX2-OT-244, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 692 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-244ENST00000627738 AEBP2Q6ZN18 517 aaPredicted RBP28.13■■■□□ 2.09
SOX2-OT-244ENST00000627738 CHIC1Q5VXU3 224 aa26.54■■□□□ 1.84
SOX2-OT-244ENST00000627738 SENP3Q9H4L4 574 aaPredicted RBP23.98■■□□□ 1.43
SOX2-OT-244ENST00000627738 PHF23Q9BUL5 403 aaPredicted RBP23.7■■□□□ 1.38
SOX2-OT-244ENST00000627738 NISCHQ9Y2I1 1504 aa22.68■■□□□ 1.22
SOX2-OT-244ENST00000627738 FOXD1Q16676 465 aa22.41■■□□□ 1.18
SOX2-OT-244ENST00000627738 PLPPR3Q6T4P5 718 aa21.16■□□□□ 0.98
SOX2-OT-244ENST00000627738 MSH5O43196 834 aa20.97■□□□□ 0.95
SOX2-OT-244ENST00000627738 PIAS4Q8N2W9 510 aaPredicted RBP20.95■□□□□ 0.94
SOX2-OT-244ENST00000627738 PPP6R1Q9UPN7 881 aa20.87■□□□□ 0.93
SOX2-OT-244ENST00000627738 ADRA2BP18089 450 aa20.84■□□□□ 0.93
SOX2-OT-244ENST00000627738 POTEDQ86YR6 584 aa20.74■□□□□ 0.91
SOX2-OT-244ENST00000627738 CCDC180Q9P1Z9 1646 aa19.81■□□□□ 0.76
SOX2-OT-244ENST00000627738 MAPK8IP2Q13387 824 aaPredicted RBP19.19■□□□□ 0.66
SOX2-OT-244ENST00000627738 ZCCHC6Q5VYS8 1495 aaKnown RBP19.03■□□□□ 0.64
SOX2-OT-244ENST00000627738 DMRT2Q9Y5R5 561 aa18.99■□□□□ 0.63
SOX2-OT-244ENST00000627738 SCAF1Q9H7N4 1312 aaKnown RBP18.99■□□□□ 0.63
SOX2-OT-244ENST00000627738 ABCC9O60706 1549 aa18.86■□□□□ 0.61
SOX2-OT-244ENST00000627738 DCAF8L2P0C7V8 631 aa18.81■□□□□ 0.6
SOX2-OT-244ENST00000627738 DCAF1Q9Y4B6 1507 aa18.74■□□□□ 0.59
SOX2-OT-244ENST00000627738 PPP4R3CPQ6ZMV5 832 aa18.56■□□□□ 0.56
SOX2-OT-244ENST00000627738 MYO15BQ96JP2 1530 aa18.55■□□□□ 0.56
SOX2-OT-244ENST00000627738 NACADO15069 1562 aa18.48■□□□□ 0.55
SOX2-OT-244ENST00000627738 SHROOM4Q9ULL8 1493 aa18.46■□□□□ 0.55
SOX2-OT-244ENST00000627738 DCAF8L1A6NGE4 600 aa18.41■□□□□ 0.54
SOX2-OT-244ENST00000627738 RB1CC1Q8TDY2 1594 aa18.35■□□□□ 0.53
SOX2-OT-244ENST00000627738 KCNA4P22459 653 aa18.28■□□□□ 0.52
SOX2-OT-244ENST00000627738 SCRIBQ14160 1630 aa18.23■□□□□ 0.51
SOX2-OT-244ENST00000627738 HOXD11P31277 338 aaPredicted RBP18.2■□□□□ 0.5
SOX2-OT-244ENST00000627738 CNKSR2Q8WXI2 1034 aa18.2■□□□□ 0.5
SOX2-OT-244ENST00000627738 CACNB1Q02641 598 aaPredicted RBP18.17■□□□□ 0.5
SOX2-OT-244ENST00000627738 RNF216Q9NWF9 866 aaPredicted RBP18.05■□□□□ 0.48
SOX2-OT-244ENST00000627738 UNC13AQ9UPW8 1703 aa17.97■□□□□ 0.47
SOX2-OT-244ENST00000627738 NCBP3Q53F19 620 aaKnown RBP17.94■□□□□ 0.46
SOX2-OT-244ENST00000627738 RNF39Q9H2S5 420 aa17.89■□□□□ 0.45
SOX2-OT-244ENST00000627738 BICRAQ9NZM4 1560 aa17.8■□□□□ 0.44
SOX2-OT-244ENST00000627738 PABPN1Q86U42 306 aaKnown RBP eCLIP17.78■□□□□ 0.44
SOX2-OT-244ENST00000627738 SUPT5HO00267 1087 aaKnown RBP17.71■□□□□ 0.43
SOX2-OT-244ENST00000627738 CECR2Q9BXF3 1484 aa17.65■□□□□ 0.42
SOX2-OT-244ENST00000627738 NPM3O75607 178 aaKnown RBP17.62■□□□□ 0.41
SOX2-OT-244ENST00000627738 C1QBPQ07021 282 aaKnown RBP17.6■□□□□ 0.41
SOX2-OT-244ENST00000627738 RSF1Q96T23 1441 aaPredicted RBP17.56■□□□□ 0.4
SOX2-OT-244ENST00000627738 MROH2BQ7Z745 1585 aa17.53■□□□□ 0.4
SOX2-OT-244ENST00000627738 EHMT2Q96KQ7 1210 aa17.52■□□□□ 0.4
SOX2-OT-244ENST00000627738 BAZ1AQ9NRL2 1556 aaPredicted RBP17.52■□□□□ 0.39
SOX2-OT-244ENST00000627738 SLC4A1APQ9BWU0 796 aaKnown RBP17.51■□□□□ 0.39
SOX2-OT-244ENST00000627738 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.48■□□□□ 0.39
SOX2-OT-244ENST00000627738 DNAJC5BQ9UF47 199 aa17.48■□□□□ 0.39
SOX2-OT-244ENST00000627738 SMARCA4P51532 1647 aa17.46■□□□□ 0.39
SOX2-OT-244ENST00000627738 WIZO95785 1651 aa17.38■□□□□ 0.37
SOX2-OT-244ENST00000627738 EIF4G1Q04637 1599 aaKnown RBP17.28■□□□□ 0.36
SOX2-OT-244ENST00000627738 PEG3Q9GZU2 1588 aa17.23■□□□□ 0.35
SOX2-OT-244ENST00000627738 ATAD2BQ9ULI0 1458 aa17.21■□□□□ 0.35
SOX2-OT-244ENST00000627738 TOP2AP11388 1531 aaKnown RBP17.19■□□□□ 0.34
SOX2-OT-244ENST00000627738 SMARCA2P51531 1590 aa17.18■□□□□ 0.34
SOX2-OT-244ENST00000627738 BAZ1BQ9UIG0 1483 aaKnown RBP17.11■□□□□ 0.33
SOX2-OT-244ENST00000627738 NCAPD3P42695 1498 aa17.07■□□□□ 0.32
SOX2-OT-244ENST00000627738 CC2D2AQ9P2K1 1620 aa17.06■□□□□ 0.32
SOX2-OT-244ENST00000627738 U3KPZ7 1027 aaPredicted RBP17.04■□□□□ 0.32
SOX2-OT-244ENST00000627738 HMGXB3Q12766 1538 aa17.03■□□□□ 0.32
SOX2-OT-244ENST00000627738 CCDC88BA6NC98 1476 aa17.02■□□□□ 0.32
SOX2-OT-244ENST00000627738 CSRNP3Q8WYN3 585 aa17.01■□□□□ 0.31
SOX2-OT-244ENST00000627738 CAPN15O75808 1086 aa16.89■□□□□ 0.29
SOX2-OT-244ENST00000627738 SPINK5Q9NQ38 1064 aaPredicted RBP16.88■□□□□ 0.29
SOX2-OT-244ENST00000627738 SLC4A2P04920 1241 aa16.79■□□□□ 0.28
SOX2-OT-244ENST00000627738 ZBTB22O15209 634 aa16.78■□□□□ 0.28
SOX2-OT-244ENST00000627738 DSG3P32926 999 aa16.72■□□□□ 0.27
SOX2-OT-244ENST00000627738 FOXD4L1Q9NU39 408 aa16.7■□□□□ 0.26
SOX2-OT-244ENST00000627738 TRIM41Q8WV44 630 aa16.66■□□□□ 0.26
SOX2-OT-244ENST00000627738 CFTRP13569 1480 aa16.66■□□□□ 0.26
SOX2-OT-244ENST00000627738 ABCC8Q09428 1581 aa16.64■□□□□ 0.25
SOX2-OT-244ENST00000627738 CADPSQ9ULU8 1353 aa16.64■□□□□ 0.25
SOX2-OT-244ENST00000627738 TRHP20396 242 aaPredicted RBP16.6■□□□□ 0.25
SOX2-OT-244ENST00000627738 PRDM2Q13029 1718 aa16.55■□□□□ 0.24
SOX2-OT-244ENST00000627738 WRNQ14191 1432 aaPredicted RBP eCLIP16.54■□□□□ 0.24
SOX2-OT-244ENST00000627738 NESP48681 1621 aa16.52■□□□□ 0.24
SOX2-OT-244ENST00000627738 ABCB7O75027 752 aa16.51■□□□□ 0.23
SOX2-OT-244ENST00000627738 APLP2Q06481 763 aa16.5■□□□□ 0.23
SOX2-OT-244ENST00000627738 LAMC3Q9Y6N6 1575 aa16.5■□□□□ 0.23
SOX2-OT-244ENST00000627738 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.47■□□□□ 0.23
SOX2-OT-244ENST00000627738 HNRNPUL2Q1KMD3 747 aaKnown RBP16.47■□□□□ 0.23
SOX2-OT-244ENST00000627738 SYNJ1O43426 1573 aa16.47■□□□□ 0.23
SOX2-OT-244ENST00000627738 ZNF219Q9P2Y4 722 aaPredicted RBP16.45■□□□□ 0.22
SOX2-OT-244ENST00000627738 FANCD2Q9BXW9 1451 aa16.45■□□□□ 0.22
SOX2-OT-244ENST00000627738 TOP2BQ02880 1626 aa16.4■□□□□ 0.22
SOX2-OT-244ENST00000627738 CUX1P39880 1505 aa16.4■□□□□ 0.22
SOX2-OT-244ENST00000627738 BIVM-ERCC5R4GMW8 1640 aa16.38■□□□□ 0.21
SOX2-OT-244ENST00000627738 PDS5BQ9NTI5 1447 aa16.38■□□□□ 0.21
SOX2-OT-244ENST00000627738 SAMD1Q6SPF0 538 aaPredicted RBP16.38■□□□□ 0.21
SOX2-OT-244ENST00000627738 FAM9AQ8IZU1 332 aaPredicted RBP16.37■□□□□ 0.21
SOX2-OT-244ENST00000627738 CEP164Q9UPV0 1460 aa16.35■□□□□ 0.21
SOX2-OT-244ENST00000627738 KIF21AQ7Z4S6 1674 aa16.31■□□□□ 0.2
SOX2-OT-244ENST00000627738 SOGA1O94964 1423 aa16.3■□□□□ 0.2
SOX2-OT-244ENST00000627738 MYCNP04198 464 aaPredicted RBP16.28■□□□□ 0.2
SOX2-OT-244ENST00000627738 DNMBPQ6XZF7 1577 aa16.28■□□□□ 0.2
SOX2-OT-244ENST00000627738 TOPBP1Q92547 1522 aa16.26■□□□□ 0.19
SOX2-OT-244ENST00000627738 URB2Q14146 1524 aaKnown RBP16.25■□□□□ 0.19
SOX2-OT-244ENST00000627738 RUSC2Q8N2Y8 1516 aa16.25■□□□□ 0.19
SOX2-OT-244ENST00000627738 LOC105371045A0A1W2PR82 267 aa16.25■□□□□ 0.19
SOX2-OT-244ENST00000627738 POTEHQ6S545 545 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms