Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AC120498.10-201ENST00000621827 505 ntBASIC15.52■□□□□ 0.08
HLA-DRB4X5D2U9 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC15.52■□□□□ 0.08
HLA-DRB4X5D2U9 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
HLA-DRB4X5D2U9 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
HLA-DRB4X5D2U9 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.07
HLA-DRB4X5D2U9 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC15.52■□□□□ 0.07
HLA-DRB4X5D2U9 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
HLA-DRB4X5D2U9 AC004854.2-201ENST00000608450 1441 ntBASIC15.51■□□□□ 0.07
HLA-DRB4X5D2U9 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DRB4X5D2U9 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC15.51■□□□□ 0.07
HLA-DRB4X5D2U9 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
HLA-DRB4X5D2U9 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DRB4X5D2U9 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
HLA-DRB4X5D2U9 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DRB4X5D2U9 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DRB4X5D2U9 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
HLA-DRB4X5D2U9 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC15.51■□□□□ 0.07
HLA-DRB4X5D2U9 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DRB4X5D2U9 AC061975.6-201ENST00000579045 1553 ntBASIC15.51■□□□□ 0.07
HLA-DRB4X5D2U9 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DRB4X5D2U9 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DRB4X5D2U9 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DRB4X5D2U9 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
HLA-DRB4X5D2U9 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
HLA-DRB4X5D2U9 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC15.51■□□□□ 0.07
HLA-DRB4X5D2U9 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC15.51■□□□□ 0.07
HLA-DRB4X5D2U9 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
HLA-DRB4X5D2U9 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC15.51■□□□□ 0.07
HLA-DRB4X5D2U9 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DRB4X5D2U9 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
HLA-DRB4X5D2U9 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC15.51■□□□□ 0.07
HLA-DRB4X5D2U9 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC15.51■□□□□ 0.07
HLA-DRB4X5D2U9 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DRB4X5D2U9 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC15.51■□□□□ 0.07
HLA-DRB4X5D2U9 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC15.5■□□□□ 0.07
HLA-DRB4X5D2U9 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
HLA-DRB4X5D2U9 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HLA-DRB4X5D2U9 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC15.5■□□□□ 0.07
HLA-DRB4X5D2U9 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HLA-DRB4X5D2U9 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HLA-DRB4X5D2U9 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
HLA-DRB4X5D2U9 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HLA-DRB4X5D2U9 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HLA-DRB4X5D2U9 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HLA-DRB4X5D2U9 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
HLA-DRB4X5D2U9 KRT19P1-201ENST00000405746 1186 ntBASIC15.5■□□□□ 0.07
HLA-DRB4X5D2U9 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC15.5■□□□□ 0.07
HLA-DRB4X5D2U9 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC15.5■□□□□ 0.07
HLA-DRB4X5D2U9 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC15.5■□□□□ 0.07
HLA-DRB4X5D2U9 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC15.5■□□□□ 0.07
HLA-DRB4X5D2U9 GALNS-213ENST00000569433 723 ntTSL 3 BASIC15.5■□□□□ 0.07
HLA-DRB4X5D2U9 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC15.5■□□□□ 0.07
HLA-DRB4X5D2U9 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC15.5■□□□□ 0.07
HLA-DRB4X5D2U9 AP001160.3-201ENST00000601484 763 ntBASIC15.5■□□□□ 0.07
HLA-DRB4X5D2U9 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC15.5■□□□□ 0.07
HLA-DRB4X5D2U9 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
HLA-DRB4X5D2U9 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC15.5■□□□□ 0.07
HLA-DRB4X5D2U9 KRT16P2-201ENST00000414673 1423 ntBASIC15.5■□□□□ 0.07
HLA-DRB4X5D2U9 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HLA-DRB4X5D2U9 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HLA-DRB4X5D2U9 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
HLA-DRB4X5D2U9 AL049796.1-201ENST00000565336 1766 ntBASIC15.49■□□□□ 0.07
HLA-DRB4X5D2U9 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HLA-DRB4X5D2U9 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HLA-DRB4X5D2U9 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HLA-DRB4X5D2U9 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
HLA-DRB4X5D2U9 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC15.49■□□□□ 0.07
HLA-DRB4X5D2U9 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
HLA-DRB4X5D2U9 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HLA-DRB4X5D2U9 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HLA-DRB4X5D2U9 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HLA-DRB4X5D2U9 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC15.49■□□□□ 0.07
HLA-DRB4X5D2U9 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
HLA-DRB4X5D2U9 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HLA-DRB4X5D2U9 RARRES2P6-201ENST00000567333 442 ntBASIC15.49■□□□□ 0.07
HLA-DRB4X5D2U9 AC087623.3-201ENST00000607047 1098 ntBASIC15.49■□□□□ 0.07
HLA-DRB4X5D2U9 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC15.49■□□□□ 0.07
HLA-DRB4X5D2U9 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HLA-DRB4X5D2U9 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HLA-DRB4X5D2U9 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC15.49■□□□□ 0.07
HLA-DRB4X5D2U9 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HLA-DRB4X5D2U9 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
HLA-DRB4X5D2U9 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HLA-DRB4X5D2U9 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HLA-DRB4X5D2U9 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC15.49■□□□□ 0.07
HLA-DRB4X5D2U9 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC15.49■□□□□ 0.07
HLA-DRB4X5D2U9 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HLA-DRB4X5D2U9 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HLA-DRB4X5D2U9 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
HLA-DRB4X5D2U9 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HLA-DRB4X5D2U9 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC15.48■□□□□ 0.07
HLA-DRB4X5D2U9 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
HLA-DRB4X5D2U9 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
HLA-DRB4X5D2U9 HACD1-201ENST00000326961 773 ntTSL 2 BASIC15.48■□□□□ 0.07
HLA-DRB4X5D2U9 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
HLA-DRB4X5D2U9 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC15.48■□□□□ 0.07
HLA-DRB4X5D2U9 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HLA-DRB4X5D2U9 KRT18P20-201ENST00000548986 1279 ntBASIC15.48■□□□□ 0.07
HLA-DRB4X5D2U9 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HLA-DRB4X5D2U9 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms