Protein–RNA interactions for Protein: Q9Y6D6

ARFGEF1, Brefeldin A-inhibited guanine nucleotide-exchange protein 1, humanhuman

Predictions only

Length 1,849 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1Q9Y6D6 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC25.55■■□□□ 1.68
ARFGEF1Q9Y6D6 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
ARFGEF1Q9Y6D6 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC25.55■■□□□ 1.68
ARFGEF1Q9Y6D6 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC25.55■■□□□ 1.68
ARFGEF1Q9Y6D6 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
ARFGEF1Q9Y6D6 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
ARFGEF1Q9Y6D6 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC25.54■■□□□ 1.68
ARFGEF1Q9Y6D6 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
ARFGEF1Q9Y6D6 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC25.54■■□□□ 1.68
ARFGEF1Q9Y6D6 AC087633.2-202ENST00000565166 1439 ntBASIC25.54■■□□□ 1.68
ARFGEF1Q9Y6D6 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC25.54■■□□□ 1.68
ARFGEF1Q9Y6D6 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
ARFGEF1Q9Y6D6 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
ARFGEF1Q9Y6D6 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
ARFGEF1Q9Y6D6 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
ARFGEF1Q9Y6D6 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
ARFGEF1Q9Y6D6 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC25.53■■□□□ 1.68
ARFGEF1Q9Y6D6 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
ARFGEF1Q9Y6D6 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
ARFGEF1Q9Y6D6 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC25.53■■□□□ 1.68
ARFGEF1Q9Y6D6 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
ARFGEF1Q9Y6D6 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC25.53■■□□□ 1.68
ARFGEF1Q9Y6D6 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
ARFGEF1Q9Y6D6 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
ARFGEF1Q9Y6D6 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC25.53■■□□□ 1.68
ARFGEF1Q9Y6D6 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC25.53■■□□□ 1.68
ARFGEF1Q9Y6D6 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
ARFGEF1Q9Y6D6 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
ARFGEF1Q9Y6D6 PTPA-214ENST00000423100 988 ntTSL 2 BASIC25.53■■□□□ 1.68
ARFGEF1Q9Y6D6 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
ARFGEF1Q9Y6D6 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC25.53■■□□□ 1.68
ARFGEF1Q9Y6D6 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
ARFGEF1Q9Y6D6 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
ARFGEF1Q9Y6D6 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC25.53■■□□□ 1.68
ARFGEF1Q9Y6D6 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
ARFGEF1Q9Y6D6 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
ARFGEF1Q9Y6D6 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC25.52■■□□□ 1.68
ARFGEF1Q9Y6D6 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC25.52■■□□□ 1.68
ARFGEF1Q9Y6D6 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC25.52■■□□□ 1.68
ARFGEF1Q9Y6D6 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
ARFGEF1Q9Y6D6 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC25.52■■□□□ 1.68
ARFGEF1Q9Y6D6 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC25.52■■□□□ 1.68
ARFGEF1Q9Y6D6 AC137767.1-201ENST00000602918 1920 ntBASIC25.52■■□□□ 1.68
ARFGEF1Q9Y6D6 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
ARFGEF1Q9Y6D6 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
ARFGEF1Q9Y6D6 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
ARFGEF1Q9Y6D6 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC25.51■■□□□ 1.67
ARFGEF1Q9Y6D6 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
ARFGEF1Q9Y6D6 GGT1-206ENST00000404223 952 ntTSL 2 BASIC25.51■■□□□ 1.67
ARFGEF1Q9Y6D6 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
ARFGEF1Q9Y6D6 AP003071.4-201ENST00000562276 1284 ntBASIC25.51■■□□□ 1.67
ARFGEF1Q9Y6D6 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
ARFGEF1Q9Y6D6 AC026471.5-201ENST00000615068 467 ntBASIC25.51■■□□□ 1.67
ARFGEF1Q9Y6D6 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
ARFGEF1Q9Y6D6 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.67
ARFGEF1Q9Y6D6 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
ARFGEF1Q9Y6D6 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
ARFGEF1Q9Y6D6 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC25.51■■□□□ 1.67
ARFGEF1Q9Y6D6 AC113347.1-201ENST00000413321 391 ntBASIC25.51■■□□□ 1.67
ARFGEF1Q9Y6D6 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC25.51■■□□□ 1.67
ARFGEF1Q9Y6D6 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC25.51■■□□□ 1.67
ARFGEF1Q9Y6D6 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC25.51■■□□□ 1.67
ARFGEF1Q9Y6D6 AC003102.1-202ENST00000563394 1796 ntBASIC25.5■■□□□ 1.67
ARFGEF1Q9Y6D6 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC25.5■■□□□ 1.67
ARFGEF1Q9Y6D6 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC25.5■■□□□ 1.67
ARFGEF1Q9Y6D6 NUDT16P1-203ENST00000513809 620 ntBASIC25.5■■□□□ 1.67
ARFGEF1Q9Y6D6 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC25.5■■□□□ 1.67
ARFGEF1Q9Y6D6 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC25.5■■□□□ 1.67
ARFGEF1Q9Y6D6 AC145285.6-201ENST00000604632 637 ntBASIC25.5■■□□□ 1.67
ARFGEF1Q9Y6D6 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
ARFGEF1Q9Y6D6 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC25.5■■□□□ 1.67
ARFGEF1Q9Y6D6 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC25.5■■□□□ 1.67
ARFGEF1Q9Y6D6 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC25.49■■□□□ 1.67
ARFGEF1Q9Y6D6 TPM1-226ENST00000560959 925 ntTSL 2 BASIC25.49■■□□□ 1.67
ARFGEF1Q9Y6D6 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC25.49■■□□□ 1.67
ARFGEF1Q9Y6D6 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC25.49■■□□□ 1.67
ARFGEF1Q9Y6D6 KRT8P9-201ENST00000558927 1449 ntBASIC25.49■■□□□ 1.67
ARFGEF1Q9Y6D6 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC25.49■■□□□ 1.67
ARFGEF1Q9Y6D6 ARMC10P1-201ENST00000313754 855 ntBASIC25.49■■□□□ 1.67
ARFGEF1Q9Y6D6 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC25.49■■□□□ 1.67
ARFGEF1Q9Y6D6 RBM42-202ENST00000586618 771 ntTSL 3 BASIC25.49■■□□□ 1.67
ARFGEF1Q9Y6D6 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
ARFGEF1Q9Y6D6 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
ARFGEF1Q9Y6D6 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC25.48■■□□□ 1.67
ARFGEF1Q9Y6D6 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC25.48■■□□□ 1.67
ARFGEF1Q9Y6D6 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC25.48■■□□□ 1.67
ARFGEF1Q9Y6D6 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC25.48■■□□□ 1.67
ARFGEF1Q9Y6D6 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
ARFGEF1Q9Y6D6 SERP1-205ENST00000487153 657 ntTSL 4 BASIC25.48■■□□□ 1.67
ARFGEF1Q9Y6D6 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC25.48■■□□□ 1.67
ARFGEF1Q9Y6D6 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC25.48■■□□□ 1.67
ARFGEF1Q9Y6D6 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
ARFGEF1Q9Y6D6 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC25.47■■□□□ 1.67
ARFGEF1Q9Y6D6 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC25.47■■□□□ 1.67
ARFGEF1Q9Y6D6 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC25.47■■□□□ 1.67
ARFGEF1Q9Y6D6 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC25.47■■□□□ 1.67
ARFGEF1Q9Y6D6 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC25.47■■□□□ 1.67
ARFGEF1Q9Y6D6 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC25.47■■□□□ 1.67
ARFGEF1Q9Y6D6 NME3-204ENST00000563498 920 ntTSL 2 BASIC25.47■■□□□ 1.67
ARFGEF1Q9Y6D6 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms