Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
HCFC2Q9Y5Z7 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HCFC2Q9Y5Z7 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HCFC2Q9Y5Z7 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HCFC2Q9Y5Z7 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HCFC2Q9Y5Z7 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HCFC2Q9Y5Z7 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
HCFC2Q9Y5Z7 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
HCFC2Q9Y5Z7 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC21.76■■□□□ 1.07
HCFC2Q9Y5Z7 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
HCFC2Q9Y5Z7 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC21.76■■□□□ 1.07
HCFC2Q9Y5Z7 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
HCFC2Q9Y5Z7 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
HCFC2Q9Y5Z7 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
HCFC2Q9Y5Z7 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
HCFC2Q9Y5Z7 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
HCFC2Q9Y5Z7 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HCFC2Q9Y5Z7 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
HCFC2Q9Y5Z7 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
HCFC2Q9Y5Z7 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.75■■□□□ 1.07
HCFC2Q9Y5Z7 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HCFC2Q9Y5Z7 AC012618.2-201ENST00000428058 849 ntBASIC21.75■■□□□ 1.07
HCFC2Q9Y5Z7 FAM210CP-201ENST00000445714 574 ntBASIC21.75■■□□□ 1.07
HCFC2Q9Y5Z7 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
HCFC2Q9Y5Z7 AC233702.5-201ENST00000584107 538 ntBASIC21.75■■□□□ 1.07
HCFC2Q9Y5Z7 FAM99A-202ENST00000538190 1989 ntBASIC21.75■■□□□ 1.07
HCFC2Q9Y5Z7 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
HCFC2Q9Y5Z7 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
HCFC2Q9Y5Z7 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.75■■□□□ 1.07
HCFC2Q9Y5Z7 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
HCFC2Q9Y5Z7 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
HCFC2Q9Y5Z7 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HCFC2Q9Y5Z7 AC116050.2-201ENST00000612102 1779 ntBASIC21.74■■□□□ 1.07
HCFC2Q9Y5Z7 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.74■■□□□ 1.07
HCFC2Q9Y5Z7 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
HCFC2Q9Y5Z7 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
HCFC2Q9Y5Z7 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HCFC2Q9Y5Z7 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
HCFC2Q9Y5Z7 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
HCFC2Q9Y5Z7 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
HCFC2Q9Y5Z7 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
HCFC2Q9Y5Z7 RPS20-210ENST00000523936 899 ntTSL 2 BASIC21.74■■□□□ 1.07
HCFC2Q9Y5Z7 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC21.74■■□□□ 1.07
HCFC2Q9Y5Z7 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.74■■□□□ 1.07
HCFC2Q9Y5Z7 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
HCFC2Q9Y5Z7 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
HCFC2Q9Y5Z7 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
HCFC2Q9Y5Z7 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
HCFC2Q9Y5Z7 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.74■■□□□ 1.07
HCFC2Q9Y5Z7 AC127496.7-201ENST00000625110 1798 ntBASIC21.74■■□□□ 1.07
HCFC2Q9Y5Z7 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HCFC2Q9Y5Z7 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.73■■□□□ 1.07
HCFC2Q9Y5Z7 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
HCFC2Q9Y5Z7 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
HCFC2Q9Y5Z7 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.73■■□□□ 1.07
HCFC2Q9Y5Z7 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
HCFC2Q9Y5Z7 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
HCFC2Q9Y5Z7 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC21.73■■□□□ 1.07
HCFC2Q9Y5Z7 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC21.73■■□□□ 1.07
HCFC2Q9Y5Z7 RPS2P55-201ENST00000397318 883 ntBASIC21.73■■□□□ 1.07
HCFC2Q9Y5Z7 MIR1224-201ENST00000408193 85 ntBASIC21.73■■□□□ 1.07
HCFC2Q9Y5Z7 AC107956.1-201ENST00000494359 873 ntBASIC21.73■■□□□ 1.07
HCFC2Q9Y5Z7 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
HCFC2Q9Y5Z7 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
HCFC2Q9Y5Z7 C2orf69P4-201ENST00000565394 541 ntBASIC21.73■■□□□ 1.07
HCFC2Q9Y5Z7 MTDHP1-201ENST00000605323 784 ntBASIC21.73■■□□□ 1.07
HCFC2Q9Y5Z7 LINC01023-201ENST00000606054 436 ntBASIC21.73■■□□□ 1.07
HCFC2Q9Y5Z7 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
HCFC2Q9Y5Z7 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
HCFC2Q9Y5Z7 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HCFC2Q9Y5Z7 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
HCFC2Q9Y5Z7 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
HCFC2Q9Y5Z7 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
HCFC2Q9Y5Z7 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
HCFC2Q9Y5Z7 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.73■■□□□ 1.07
HCFC2Q9Y5Z7 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
HCFC2Q9Y5Z7 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.73■■□□□ 1.07
HCFC2Q9Y5Z7 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HCFC2Q9Y5Z7 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
HCFC2Q9Y5Z7 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
HCFC2Q9Y5Z7 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HCFC2Q9Y5Z7 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
HCFC2Q9Y5Z7 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HCFC2Q9Y5Z7 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
HCFC2Q9Y5Z7 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
HCFC2Q9Y5Z7 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HCFC2Q9Y5Z7 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
HCFC2Q9Y5Z7 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
HCFC2Q9Y5Z7 REXO2-216ENST00000544196 452 ntTSL 3 BASIC21.72■■□□□ 1.07
HCFC2Q9Y5Z7 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC21.72■■□□□ 1.07
HCFC2Q9Y5Z7 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC21.72■■□□□ 1.07
HCFC2Q9Y5Z7 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC21.72■■□□□ 1.07
HCFC2Q9Y5Z7 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HCFC2Q9Y5Z7 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC21.72■■□□□ 1.07
HCFC2Q9Y5Z7 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
HCFC2Q9Y5Z7 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
HCFC2Q9Y5Z7 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HCFC2Q9Y5Z7 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HCFC2Q9Y5Z7 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
HCFC2Q9Y5Z7 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms