Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHGA6Q9Y5G7 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHGA6Q9Y5G7 PKD1P6-201ENST00000343738 4769 ntBASIC19.88■□□□□ 0.77
PCDHGA6Q9Y5G7 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
PCDHGA6Q9Y5G7 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHGA6Q9Y5G7 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHGA6Q9Y5G7 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.88■□□□□ 0.77
PCDHGA6Q9Y5G7 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.88■□□□□ 0.77
PCDHGA6Q9Y5G7 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHGA6Q9Y5G7 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHGA6Q9Y5G7 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
PCDHGA6Q9Y5G7 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHGA6Q9Y5G7 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHGA6Q9Y5G7 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHGA6Q9Y5G7 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.88■□□□□ 0.77
PCDHGA6Q9Y5G7 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHGA6Q9Y5G7 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHGA6Q9Y5G7 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHGA6Q9Y5G7 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHGA6Q9Y5G7 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHGA6Q9Y5G7 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.87■□□□□ 0.77
PCDHGA6Q9Y5G7 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHGA6Q9Y5G7 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHGA6Q9Y5G7 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHGA6Q9Y5G7 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHGA6Q9Y5G7 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.87■□□□□ 0.77
PCDHGA6Q9Y5G7 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.87■□□□□ 0.77
PCDHGA6Q9Y5G7 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.87■□□□□ 0.77
PCDHGA6Q9Y5G7 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHGA6Q9Y5G7 MKRN4P-201ENST00000444706 1521 ntBASIC19.86■□□□□ 0.77
PCDHGA6Q9Y5G7 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHGA6Q9Y5G7 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
PCDHGA6Q9Y5G7 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHGA6Q9Y5G7 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHGA6Q9Y5G7 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHGA6Q9Y5G7 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
PCDHGA6Q9Y5G7 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
PCDHGA6Q9Y5G7 MIPEPP3-201ENST00000412105 444 ntBASIC19.86■□□□□ 0.77
PCDHGA6Q9Y5G7 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHGA6Q9Y5G7 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.86■□□□□ 0.77
PCDHGA6Q9Y5G7 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.86■□□□□ 0.77
PCDHGA6Q9Y5G7 AC069236.1-201ENST00000604339 616 ntBASIC19.86■□□□□ 0.77
PCDHGA6Q9Y5G7 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
PCDHGA6Q9Y5G7 AC008694.1-202ENST00000636953 945 ntBASIC19.86■□□□□ 0.77
PCDHGA6Q9Y5G7 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
PCDHGA6Q9Y5G7 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
PCDHGA6Q9Y5G7 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHGA6Q9Y5G7 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHGA6Q9Y5G7 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHGA6Q9Y5G7 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.86■□□□□ 0.77
PCDHGA6Q9Y5G7 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.86■□□□□ 0.77
PCDHGA6Q9Y5G7 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHGA6Q9Y5G7 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHGA6Q9Y5G7 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHGA6Q9Y5G7 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHGA6Q9Y5G7 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHGA6Q9Y5G7 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.85■□□□□ 0.77
PCDHGA6Q9Y5G7 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHGA6Q9Y5G7 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHGA6Q9Y5G7 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.85■□□□□ 0.77
PCDHGA6Q9Y5G7 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHGA6Q9Y5G7 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHGA6Q9Y5G7 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHGA6Q9Y5G7 Z98882.1-201ENST00000622160 2253 ntBASIC19.85■□□□□ 0.77
PCDHGA6Q9Y5G7 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.85■□□□□ 0.77
PCDHGA6Q9Y5G7 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHGA6Q9Y5G7 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
PCDHGA6Q9Y5G7 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
PCDHGA6Q9Y5G7 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.85■□□□□ 0.77
PCDHGA6Q9Y5G7 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.85■□□□□ 0.77
PCDHGA6Q9Y5G7 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHGA6Q9Y5G7 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
PCDHGA6Q9Y5G7 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHGA6Q9Y5G7 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.85■□□□□ 0.77
PCDHGA6Q9Y5G7 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.85■□□□□ 0.77
PCDHGA6Q9Y5G7 AC098934.4-201ENST00000564127 592 ntBASIC19.85■□□□□ 0.77
PCDHGA6Q9Y5G7 AL162412.1-201ENST00000567129 965 ntBASIC19.85■□□□□ 0.77
PCDHGA6Q9Y5G7 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.85■□□□□ 0.77
PCDHGA6Q9Y5G7 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.85■□□□□ 0.77
PCDHGA6Q9Y5G7 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHGA6Q9Y5G7 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHGA6Q9Y5G7 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHGA6Q9Y5G7 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHGA6Q9Y5G7 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHGA6Q9Y5G7 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHGA6Q9Y5G7 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHGA6Q9Y5G7 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.85■□□□□ 0.77
PCDHGA6Q9Y5G7 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.85■□□□□ 0.77
PCDHGA6Q9Y5G7 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHGA6Q9Y5G7 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHGA6Q9Y5G7 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHGA6Q9Y5G7 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.84■□□□□ 0.77
PCDHGA6Q9Y5G7 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.84■□□□□ 0.77
PCDHGA6Q9Y5G7 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
PCDHGA6Q9Y5G7 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.84■□□□□ 0.77
PCDHGA6Q9Y5G7 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.84■□□□□ 0.77
PCDHGA6Q9Y5G7 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHGA6Q9Y5G7 MIR4651-201ENST00000582622 73 ntBASIC19.84■□□□□ 0.77
PCDHGA6Q9Y5G7 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.84■□□□□ 0.77
PCDHGA6Q9Y5G7 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 9.5 ms