Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
YIPF1Q9Y548 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.7■■□□□ 1.06
YIPF1Q9Y548 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
YIPF1Q9Y548 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
YIPF1Q9Y548 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
YIPF1Q9Y548 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
YIPF1Q9Y548 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
YIPF1Q9Y548 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC21.7■■□□□ 1.06
YIPF1Q9Y548 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
YIPF1Q9Y548 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
YIPF1Q9Y548 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
YIPF1Q9Y548 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
YIPF1Q9Y548 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
YIPF1Q9Y548 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
YIPF1Q9Y548 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
YIPF1Q9Y548 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
YIPF1Q9Y548 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
YIPF1Q9Y548 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
YIPF1Q9Y548 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
YIPF1Q9Y548 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
YIPF1Q9Y548 RPS2P52-201ENST00000469610 820 ntBASIC21.69■■□□□ 1.06
YIPF1Q9Y548 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
YIPF1Q9Y548 AC093827.2-201ENST00000512654 315 ntBASIC21.69■■□□□ 1.06
YIPF1Q9Y548 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
YIPF1Q9Y548 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC21.69■■□□□ 1.06
YIPF1Q9Y548 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
YIPF1Q9Y548 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
YIPF1Q9Y548 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
YIPF1Q9Y548 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
YIPF1Q9Y548 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
YIPF1Q9Y548 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
YIPF1Q9Y548 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC21.68■■□□□ 1.06
YIPF1Q9Y548 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC21.68■■□□□ 1.06
YIPF1Q9Y548 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
YIPF1Q9Y548 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
YIPF1Q9Y548 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.68■■□□□ 1.06
YIPF1Q9Y548 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
YIPF1Q9Y548 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
YIPF1Q9Y548 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
YIPF1Q9Y548 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
YIPF1Q9Y548 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
YIPF1Q9Y548 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
YIPF1Q9Y548 MFF-205ENST00000354503 1085 ntTSL 2 BASIC21.67■■□□□ 1.06
YIPF1Q9Y548 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC21.67■■□□□ 1.06
YIPF1Q9Y548 GCSHP5-201ENST00000443090 522 ntBASIC21.67■■□□□ 1.06
YIPF1Q9Y548 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
YIPF1Q9Y548 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC21.67■■□□□ 1.06
YIPF1Q9Y548 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
YIPF1Q9Y548 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC21.67■■□□□ 1.06
YIPF1Q9Y548 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
YIPF1Q9Y548 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.67■■□□□ 1.06
YIPF1Q9Y548 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.66■■□□□ 1.06
YIPF1Q9Y548 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
YIPF1Q9Y548 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
YIPF1Q9Y548 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
YIPF1Q9Y548 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
YIPF1Q9Y548 HES2-205ENST00000487437 968 ntTSL 3 BASIC21.66■■□□□ 1.06
YIPF1Q9Y548 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
YIPF1Q9Y548 PNMA6B-201ENST00000538162 1200 ntBASIC21.66■■□□□ 1.06
YIPF1Q9Y548 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
YIPF1Q9Y548 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC21.66■■□□□ 1.06
YIPF1Q9Y548 AC073648.6-201ENST00000641589 218 ntBASIC21.66■■□□□ 1.06
YIPF1Q9Y548 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
YIPF1Q9Y548 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
YIPF1Q9Y548 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
YIPF1Q9Y548 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
YIPF1Q9Y548 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
YIPF1Q9Y548 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
YIPF1Q9Y548 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
YIPF1Q9Y548 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
YIPF1Q9Y548 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
YIPF1Q9Y548 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
YIPF1Q9Y548 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
YIPF1Q9Y548 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC21.65■■□□□ 1.06
YIPF1Q9Y548 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
YIPF1Q9Y548 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC21.65■■□□□ 1.06
YIPF1Q9Y548 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC21.65■■□□□ 1.06
YIPF1Q9Y548 AC008403.3-201ENST00000598924 454 ntBASIC21.65■■□□□ 1.06
YIPF1Q9Y548 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
YIPF1Q9Y548 MMD2-204ENST00000612910 778 ntTSL 5 BASIC21.65■■□□□ 1.06
YIPF1Q9Y548 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC21.65■■□□□ 1.06
YIPF1Q9Y548 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
YIPF1Q9Y548 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
YIPF1Q9Y548 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.65■■□□□ 1.06
YIPF1Q9Y548 AC092368.3-202ENST00000574180 1591 ntBASIC21.65■■□□□ 1.06
YIPF1Q9Y548 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
YIPF1Q9Y548 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.64■■□□□ 1.06
YIPF1Q9Y548 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
YIPF1Q9Y548 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
YIPF1Q9Y548 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
YIPF1Q9Y548 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
YIPF1Q9Y548 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.64■■□□□ 1.05
YIPF1Q9Y548 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21.64■■□□□ 1.05
YIPF1Q9Y548 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC21.64■■□□□ 1.05
YIPF1Q9Y548 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
YIPF1Q9Y548 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
YIPF1Q9Y548 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC21.63■■□□□ 1.05
YIPF1Q9Y548 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
YIPF1Q9Y548 AC087633.2-202ENST00000565166 1439 ntBASIC21.63■■□□□ 1.05
YIPF1Q9Y548 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms