Protein–RNA interactions for Protein: Q9NZR2

LRP1B, Low-density lipoprotein receptor-related protein 1B, humanhuman

Predictions only

Length 4,599 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1BQ9NZR2 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LRP1BQ9NZR2 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC13.26□□□□□ -0.29
LRP1BQ9NZR2 TERF1P1-201ENST00000311003 1181 ntBASIC13.26□□□□□ -0.29
LRP1BQ9NZR2 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
LRP1BQ9NZR2 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC13.26□□□□□ -0.29
LRP1BQ9NZR2 KRT18P57-201ENST00000443599 1254 ntBASIC13.26□□□□□ -0.29
LRP1BQ9NZR2 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC13.26□□□□□ -0.29
LRP1BQ9NZR2 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC13.26□□□□□ -0.29
LRP1BQ9NZR2 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC13.26□□□□□ -0.29
LRP1BQ9NZR2 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
LRP1BQ9NZR2 KRT8P9-201ENST00000558927 1449 ntBASIC13.26□□□□□ -0.29
LRP1BQ9NZR2 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LRP1BQ9NZR2 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
LRP1BQ9NZR2 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC13.25□□□□□ -0.29
LRP1BQ9NZR2 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LRP1BQ9NZR2 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC13.25□□□□□ -0.29
LRP1BQ9NZR2 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
LRP1BQ9NZR2 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LRP1BQ9NZR2 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC13.25□□□□□ -0.29
LRP1BQ9NZR2 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
LRP1BQ9NZR2 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC13.25□□□□□ -0.29
LRP1BQ9NZR2 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC13.25□□□□□ -0.29
LRP1BQ9NZR2 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC13.25□□□□□ -0.29
LRP1BQ9NZR2 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LRP1BQ9NZR2 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LRP1BQ9NZR2 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LRP1BQ9NZR2 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC13.25□□□□□ -0.29
LRP1BQ9NZR2 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LRP1BQ9NZR2 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LRP1BQ9NZR2 TPM1-226ENST00000560959 925 ntTSL 2 BASIC13.25□□□□□ -0.29
LRP1BQ9NZR2 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC13.25□□□□□ -0.29
LRP1BQ9NZR2 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC13.25□□□□□ -0.29
LRP1BQ9NZR2 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LRP1BQ9NZR2 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LRP1BQ9NZR2 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LRP1BQ9NZR2 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LRP1BQ9NZR2 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC13.25□□□□□ -0.29
LRP1BQ9NZR2 AC113410.3-201ENST00000623366 203 ntBASIC13.25□□□□□ -0.29
LRP1BQ9NZR2 AC092865.7-201ENST00000641832 219 ntBASIC13.25□□□□□ -0.29
LRP1BQ9NZR2 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LRP1BQ9NZR2 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
LRP1BQ9NZR2 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LRP1BQ9NZR2 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC13.24□□□□□ -0.29
LRP1BQ9NZR2 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC13.24□□□□□ -0.29
LRP1BQ9NZR2 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LRP1BQ9NZR2 NXN-202ENST00000537628 1340 ntTSL 3 BASIC13.24□□□□□ -0.29
LRP1BQ9NZR2 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC13.24□□□□□ -0.29
LRP1BQ9NZR2 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
LRP1BQ9NZR2 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LRP1BQ9NZR2 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC13.24□□□□□ -0.29
LRP1BQ9NZR2 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LRP1BQ9NZR2 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LRP1BQ9NZR2 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LRP1BQ9NZR2 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC13.24□□□□□ -0.29
LRP1BQ9NZR2 PENK-204ENST00000518770 863 ntTSL 2 BASIC13.24□□□□□ -0.29
LRP1BQ9NZR2 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC13.24□□□□□ -0.29
LRP1BQ9NZR2 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
LRP1BQ9NZR2 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LRP1BQ9NZR2 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LRP1BQ9NZR2 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
LRP1BQ9NZR2 RBM42-202ENST00000586618 771 ntTSL 3 BASIC13.23□□□□□ -0.29
LRP1BQ9NZR2 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC13.23□□□□□ -0.29
LRP1BQ9NZR2 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC13.23□□□□□ -0.29
LRP1BQ9NZR2 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC13.23□□□□□ -0.29
LRP1BQ9NZR2 KRT17P2-201ENST00000300992 1314 ntBASIC13.23□□□□□ -0.29
LRP1BQ9NZR2 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LRP1BQ9NZR2 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC13.23□□□□□ -0.29
LRP1BQ9NZR2 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LRP1BQ9NZR2 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
LRP1BQ9NZR2 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LRP1BQ9NZR2 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC13.23□□□□□ -0.29
LRP1BQ9NZR2 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC13.23□□□□□ -0.29
LRP1BQ9NZR2 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LRP1BQ9NZR2 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC13.23□□□□□ -0.29
LRP1BQ9NZR2 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
LRP1BQ9NZR2 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LRP1BQ9NZR2 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LRP1BQ9NZR2 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LRP1BQ9NZR2 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LRP1BQ9NZR2 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC13.23□□□□□ -0.29
LRP1BQ9NZR2 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LRP1BQ9NZR2 TERT-206ENST00000508104 2486 ntTSL 5 BASIC13.23□□□□□ -0.29
LRP1BQ9NZR2 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
LRP1BQ9NZR2 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LRP1BQ9NZR2 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LRP1BQ9NZR2 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
LRP1BQ9NZR2 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
LRP1BQ9NZR2 SAPCD2P4-201ENST00000424595 1171 ntBASIC13.23□□□□□ -0.29
LRP1BQ9NZR2 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC13.23□□□□□ -0.29
LRP1BQ9NZR2 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC13.23□□□□□ -0.29
LRP1BQ9NZR2 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LRP1BQ9NZR2 AC026471.6-201ENST00000622954 1905 ntBASIC13.23□□□□□ -0.29
LRP1BQ9NZR2 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LRP1BQ9NZR2 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LRP1BQ9NZR2 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
LRP1BQ9NZR2 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LRP1BQ9NZR2 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LRP1BQ9NZR2 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LRP1BQ9NZR2 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LRP1BQ9NZR2 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms