Protein–RNA interactions for Protein: Q9NSI6

BRWD1, Bromodomain and WD repeat-containing protein 1, humanhuman

Predictions only

Length 2,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRWD1Q9NSI6 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC21.73■■□□□ 1.07
BRWD1Q9NSI6 TPM1-226ENST00000560959 925 ntTSL 2 BASIC21.73■■□□□ 1.07
BRWD1Q9NSI6 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
BRWD1Q9NSI6 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
BRWD1Q9NSI6 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
BRWD1Q9NSI6 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
BRWD1Q9NSI6 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
BRWD1Q9NSI6 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
BRWD1Q9NSI6 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
BRWD1Q9NSI6 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
BRWD1Q9NSI6 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
BRWD1Q9NSI6 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
BRWD1Q9NSI6 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
BRWD1Q9NSI6 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.72■■□□□ 1.07
BRWD1Q9NSI6 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
BRWD1Q9NSI6 AC110285.5-201ENST00000611501 352 ntBASIC21.72■■□□□ 1.07
BRWD1Q9NSI6 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC21.72■■□□□ 1.07
BRWD1Q9NSI6 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
BRWD1Q9NSI6 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
BRWD1Q9NSI6 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
BRWD1Q9NSI6 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
BRWD1Q9NSI6 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
BRWD1Q9NSI6 RNF146-204ENST00000476956 884 ntTSL 2 BASIC21.72■■□□□ 1.07
BRWD1Q9NSI6 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.72■■□□□ 1.07
BRWD1Q9NSI6 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
BRWD1Q9NSI6 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
BRWD1Q9NSI6 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
BRWD1Q9NSI6 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC21.71■■□□□ 1.07
BRWD1Q9NSI6 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
BRWD1Q9NSI6 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
BRWD1Q9NSI6 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
BRWD1Q9NSI6 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC21.71■■□□□ 1.07
BRWD1Q9NSI6 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC21.71■■□□□ 1.07
BRWD1Q9NSI6 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC21.71■■□□□ 1.07
BRWD1Q9NSI6 NUDT16P1-203ENST00000513809 620 ntBASIC21.71■■□□□ 1.07
BRWD1Q9NSI6 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC21.71■■□□□ 1.07
BRWD1Q9NSI6 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
BRWD1Q9NSI6 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
BRWD1Q9NSI6 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
BRWD1Q9NSI6 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.7■■□□□ 1.06
BRWD1Q9NSI6 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.7■■□□□ 1.06
BRWD1Q9NSI6 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
BRWD1Q9NSI6 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
BRWD1Q9NSI6 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC21.7■■□□□ 1.06
BRWD1Q9NSI6 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
BRWD1Q9NSI6 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
BRWD1Q9NSI6 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
BRWD1Q9NSI6 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC21.7■■□□□ 1.06
BRWD1Q9NSI6 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
BRWD1Q9NSI6 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC21.69■■□□□ 1.06
BRWD1Q9NSI6 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC21.69■■□□□ 1.06
BRWD1Q9NSI6 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC21.69■■□□□ 1.06
BRWD1Q9NSI6 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC21.69■■□□□ 1.06
BRWD1Q9NSI6 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
BRWD1Q9NSI6 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
BRWD1Q9NSI6 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
BRWD1Q9NSI6 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
BRWD1Q9NSI6 AC139530.1-201ENST00000575312 1977 ntBASIC21.69■■□□□ 1.06
BRWD1Q9NSI6 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
BRWD1Q9NSI6 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
BRWD1Q9NSI6 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
BRWD1Q9NSI6 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC21.68■■□□□ 1.06
BRWD1Q9NSI6 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC21.68■■□□□ 1.06
BRWD1Q9NSI6 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
BRWD1Q9NSI6 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.68■■□□□ 1.06
BRWD1Q9NSI6 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
BRWD1Q9NSI6 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
BRWD1Q9NSI6 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC21.68■■□□□ 1.06
BRWD1Q9NSI6 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.68■■□□□ 1.06
BRWD1Q9NSI6 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC21.68■■□□□ 1.06
BRWD1Q9NSI6 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
BRWD1Q9NSI6 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC21.68■■□□□ 1.06
BRWD1Q9NSI6 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
BRWD1Q9NSI6 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
BRWD1Q9NSI6 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
BRWD1Q9NSI6 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
BRWD1Q9NSI6 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC21.67■■□□□ 1.06
BRWD1Q9NSI6 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC21.67■■□□□ 1.06
BRWD1Q9NSI6 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC21.67■■□□□ 1.06
BRWD1Q9NSI6 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC21.67■■□□□ 1.06
BRWD1Q9NSI6 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
BRWD1Q9NSI6 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
BRWD1Q9NSI6 GGT1-206ENST00000404223 952 ntTSL 2 BASIC21.67■■□□□ 1.06
BRWD1Q9NSI6 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC21.67■■□□□ 1.06
BRWD1Q9NSI6 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC21.67■■□□□ 1.06
BRWD1Q9NSI6 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
BRWD1Q9NSI6 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
BRWD1Q9NSI6 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.67■■□□□ 1.06
BRWD1Q9NSI6 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
BRWD1Q9NSI6 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
BRWD1Q9NSI6 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
BRWD1Q9NSI6 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC21.66■■□□□ 1.06
BRWD1Q9NSI6 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC21.66■■□□□ 1.06
BRWD1Q9NSI6 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC21.66■■□□□ 1.06
BRWD1Q9NSI6 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
BRWD1Q9NSI6 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
BRWD1Q9NSI6 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
BRWD1Q9NSI6 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
BRWD1Q9NSI6 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21.66■■□□□ 1.06
BRWD1Q9NSI6 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms