Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.65
RTFDC1Q9BY42 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC25.33■■□□□ 1.65
RTFDC1Q9BY42 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC25.33■■□□□ 1.65
RTFDC1Q9BY42 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
RTFDC1Q9BY42 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC25.33■■□□□ 1.65
RTFDC1Q9BY42 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
RTFDC1Q9BY42 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC25.33■■□□□ 1.64
RTFDC1Q9BY42 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.64
RTFDC1Q9BY42 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
RTFDC1Q9BY42 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
RTFDC1Q9BY42 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
RTFDC1Q9BY42 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
RTFDC1Q9BY42 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC25.32■■□□□ 1.64
RTFDC1Q9BY42 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC25.32■■□□□ 1.64
RTFDC1Q9BY42 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC25.32■■□□□ 1.64
RTFDC1Q9BY42 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
RTFDC1Q9BY42 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC25.32■■□□□ 1.64
RTFDC1Q9BY42 AC233702.5-201ENST00000584107 538 ntBASIC25.32■■□□□ 1.64
RTFDC1Q9BY42 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC25.32■■□□□ 1.64
RTFDC1Q9BY42 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
RTFDC1Q9BY42 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC25.32■■□□□ 1.64
RTFDC1Q9BY42 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC25.32■■□□□ 1.64
RTFDC1Q9BY42 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
RTFDC1Q9BY42 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC25.32■■□□□ 1.64
RTFDC1Q9BY42 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC25.32■■□□□ 1.64
RTFDC1Q9BY42 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
RTFDC1Q9BY42 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC25.31■■□□□ 1.64
RTFDC1Q9BY42 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
RTFDC1Q9BY42 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
RTFDC1Q9BY42 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
RTFDC1Q9BY42 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
RTFDC1Q9BY42 RPS20-210ENST00000523936 899 ntTSL 2 BASIC25.31■■□□□ 1.64
RTFDC1Q9BY42 MTDHP1-201ENST00000605323 784 ntBASIC25.31■■□□□ 1.64
RTFDC1Q9BY42 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
RTFDC1Q9BY42 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC25.31■■□□□ 1.64
RTFDC1Q9BY42 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC25.31■■□□□ 1.64
RTFDC1Q9BY42 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
RTFDC1Q9BY42 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
RTFDC1Q9BY42 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
RTFDC1Q9BY42 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
RTFDC1Q9BY42 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC25.31■■□□□ 1.64
RTFDC1Q9BY42 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
RTFDC1Q9BY42 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
RTFDC1Q9BY42 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
RTFDC1Q9BY42 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
RTFDC1Q9BY42 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
RTFDC1Q9BY42 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
RTFDC1Q9BY42 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
RTFDC1Q9BY42 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
RTFDC1Q9BY42 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
RTFDC1Q9BY42 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC25.3■■□□□ 1.64
RTFDC1Q9BY42 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC25.3■■□□□ 1.64
RTFDC1Q9BY42 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC25.3■■□□□ 1.64
RTFDC1Q9BY42 C2orf69P4-201ENST00000565394 541 ntBASIC25.3■■□□□ 1.64
RTFDC1Q9BY42 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
RTFDC1Q9BY42 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
RTFDC1Q9BY42 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
RTFDC1Q9BY42 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC25.3■■□□□ 1.64
RTFDC1Q9BY42 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
RTFDC1Q9BY42 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
RTFDC1Q9BY42 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC25.29■■□□□ 1.64
RTFDC1Q9BY42 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
RTFDC1Q9BY42 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC25.29■■□□□ 1.64
RTFDC1Q9BY42 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
RTFDC1Q9BY42 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
RTFDC1Q9BY42 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC25.29■■□□□ 1.64
RTFDC1Q9BY42 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
RTFDC1Q9BY42 AC133681.1-201ENST00000465482 601 ntBASIC25.29■■□□□ 1.64
RTFDC1Q9BY42 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
RTFDC1Q9BY42 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC25.29■■□□□ 1.64
RTFDC1Q9BY42 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
RTFDC1Q9BY42 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
RTFDC1Q9BY42 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC25.29■■□□□ 1.64
RTFDC1Q9BY42 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
RTFDC1Q9BY42 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
RTFDC1Q9BY42 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
RTFDC1Q9BY42 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
RTFDC1Q9BY42 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
RTFDC1Q9BY42 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
RTFDC1Q9BY42 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
RTFDC1Q9BY42 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
RTFDC1Q9BY42 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC25.28■■□□□ 1.64
RTFDC1Q9BY42 RPS2P55-201ENST00000397318 883 ntBASIC25.28■■□□□ 1.64
RTFDC1Q9BY42 SERF2-207ENST00000409614 582 ntTSL 2 BASIC25.28■■□□□ 1.64
RTFDC1Q9BY42 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
RTFDC1Q9BY42 AC107956.1-201ENST00000494359 873 ntBASIC25.28■■□□□ 1.64
RTFDC1Q9BY42 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC25.28■■□□□ 1.64
RTFDC1Q9BY42 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
RTFDC1Q9BY42 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
RTFDC1Q9BY42 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
RTFDC1Q9BY42 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
RTFDC1Q9BY42 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC25.27■■□□□ 1.64
RTFDC1Q9BY42 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
RTFDC1Q9BY42 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
RTFDC1Q9BY42 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
RTFDC1Q9BY42 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
RTFDC1Q9BY42 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
RTFDC1Q9BY42 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
RTFDC1Q9BY42 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
RTFDC1Q9BY42 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC25.27■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms