Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.44■□□□□ 0.38
HDHD3Q9BSH5 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
HDHD3Q9BSH5 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.44■□□□□ 0.38
HDHD3Q9BSH5 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HDHD3Q9BSH5 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HDHD3Q9BSH5 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HDHD3Q9BSH5 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
HDHD3Q9BSH5 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HDHD3Q9BSH5 MAG-206ENST00000597035 542 ntTSL 4 BASIC17.44■□□□□ 0.38
HDHD3Q9BSH5 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC17.44■□□□□ 0.38
HDHD3Q9BSH5 AC131212.1-201ENST00000613771 668 ntBASIC17.44■□□□□ 0.38
HDHD3Q9BSH5 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.44■□□□□ 0.38
HDHD3Q9BSH5 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HDHD3Q9BSH5 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC17.44■□□□□ 0.38
HDHD3Q9BSH5 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HDHD3Q9BSH5 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
HDHD3Q9BSH5 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.43■□□□□ 0.38
HDHD3Q9BSH5 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HDHD3Q9BSH5 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC17.43■□□□□ 0.38
HDHD3Q9BSH5 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC17.43■□□□□ 0.38
HDHD3Q9BSH5 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HDHD3Q9BSH5 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HDHD3Q9BSH5 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
HDHD3Q9BSH5 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
HDHD3Q9BSH5 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC17.43■□□□□ 0.38
HDHD3Q9BSH5 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC17.43■□□□□ 0.38
HDHD3Q9BSH5 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC17.43■□□□□ 0.38
HDHD3Q9BSH5 GRAMD4P4-201ENST00000613563 1115 ntBASIC17.43■□□□□ 0.38
HDHD3Q9BSH5 MPST-208ENST00000628507 698 ntTSL 5 BASIC17.43■□□□□ 0.38
HDHD3Q9BSH5 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.43■□□□□ 0.38
HDHD3Q9BSH5 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HDHD3Q9BSH5 AL512408.1-201ENST00000569378 2000 ntBASIC17.43■□□□□ 0.38
HDHD3Q9BSH5 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
HDHD3Q9BSH5 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HDHD3Q9BSH5 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC17.43■□□□□ 0.38
HDHD3Q9BSH5 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HDHD3Q9BSH5 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.42■□□□□ 0.38
HDHD3Q9BSH5 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
HDHD3Q9BSH5 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
HDHD3Q9BSH5 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HDHD3Q9BSH5 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.42■□□□□ 0.38
HDHD3Q9BSH5 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
HDHD3Q9BSH5 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HDHD3Q9BSH5 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HDHD3Q9BSH5 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
HDHD3Q9BSH5 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
HDHD3Q9BSH5 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HDHD3Q9BSH5 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HDHD3Q9BSH5 MFF-208ENST00000409616 1247 ntTSL 5 BASIC17.42■□□□□ 0.38
HDHD3Q9BSH5 AC096631.2-201ENST00000436136 790 ntBASIC17.42■□□□□ 0.38
HDHD3Q9BSH5 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC17.42■□□□□ 0.38
HDHD3Q9BSH5 AC027682.1-201ENST00000562846 899 ntBASIC17.42■□□□□ 0.38
HDHD3Q9BSH5 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
HDHD3Q9BSH5 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC17.42■□□□□ 0.38
HDHD3Q9BSH5 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC17.42■□□□□ 0.38
HDHD3Q9BSH5 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HDHD3Q9BSH5 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
HDHD3Q9BSH5 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HDHD3Q9BSH5 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HDHD3Q9BSH5 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HDHD3Q9BSH5 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HDHD3Q9BSH5 AC061975.6-201ENST00000579045 1553 ntBASIC17.41■□□□□ 0.38
HDHD3Q9BSH5 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
HDHD3Q9BSH5 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HDHD3Q9BSH5 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HDHD3Q9BSH5 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HDHD3Q9BSH5 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HDHD3Q9BSH5 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC17.41■□□□□ 0.38
HDHD3Q9BSH5 PBX2P1-201ENST00000493219 1291 ntBASIC17.41■□□□□ 0.38
HDHD3Q9BSH5 AP001330.3-201ENST00000520123 633 ntBASIC17.41■□□□□ 0.38
HDHD3Q9BSH5 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC17.41■□□□□ 0.38
HDHD3Q9BSH5 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC17.41■□□□□ 0.38
HDHD3Q9BSH5 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC17.41■□□□□ 0.38
HDHD3Q9BSH5 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HDHD3Q9BSH5 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.41■□□□□ 0.38
HDHD3Q9BSH5 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
HDHD3Q9BSH5 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HDHD3Q9BSH5 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC17.41■□□□□ 0.38
HDHD3Q9BSH5 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HDHD3Q9BSH5 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
HDHD3Q9BSH5 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.41■□□□□ 0.38
HDHD3Q9BSH5 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HDHD3Q9BSH5 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.41■□□□□ 0.38
HDHD3Q9BSH5 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.41■□□□□ 0.38
HDHD3Q9BSH5 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HDHD3Q9BSH5 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HDHD3Q9BSH5 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC17.4■□□□□ 0.38
HDHD3Q9BSH5 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
HDHD3Q9BSH5 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HDHD3Q9BSH5 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HDHD3Q9BSH5 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.4■□□□□ 0.38
HDHD3Q9BSH5 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
HDHD3Q9BSH5 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HDHD3Q9BSH5 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.4■□□□□ 0.38
HDHD3Q9BSH5 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HDHD3Q9BSH5 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.4■□□□□ 0.38
HDHD3Q9BSH5 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HDHD3Q9BSH5 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC17.4■□□□□ 0.38
HDHD3Q9BSH5 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC17.4■□□□□ 0.38
HDHD3Q9BSH5 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms