Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDX2Q99626 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.96■■□□□ 1.11
CDX2Q99626 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDX2Q99626 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC21.96■■□□□ 1.11
CDX2Q99626 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDX2Q99626 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDX2Q99626 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDX2Q99626 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC21.96■■□□□ 1.11
CDX2Q99626 TMA16-209ENST00000513272 803 ntTSL 2 BASIC21.96■■□□□ 1.11
CDX2Q99626 AC005829.2-201ENST00000571422 1056 ntBASIC21.96■■□□□ 1.11
CDX2Q99626 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CDX2Q99626 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDX2Q99626 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDX2Q99626 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDX2Q99626 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC21.96■■□□□ 1.11
CDX2Q99626 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CDX2Q99626 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.95■■□□□ 1.1
CDX2Q99626 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CDX2Q99626 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC21.95■■□□□ 1.1
CDX2Q99626 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC21.95■■□□□ 1.1
CDX2Q99626 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC21.95■■□□□ 1.1
CDX2Q99626 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.95■■□□□ 1.1
CDX2Q99626 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CDX2Q99626 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CDX2Q99626 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDX2Q99626 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDX2Q99626 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.94■■□□□ 1.1
CDX2Q99626 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
CDX2Q99626 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
CDX2Q99626 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC21.94■■□□□ 1.1
CDX2Q99626 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC21.94■■□□□ 1.1
CDX2Q99626 LTBR-211ENST00000543190 785 ntTSL 3 BASIC21.94■■□□□ 1.1
CDX2Q99626 REXO1L10P-201ENST00000615707 1290 ntBASIC21.94■■□□□ 1.1
CDX2Q99626 AC010947.1-201ENST00000623454 693 ntBASIC21.94■■□□□ 1.1
CDX2Q99626 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC21.94■■□□□ 1.1
CDX2Q99626 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CDX2Q99626 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC21.94■■□□□ 1.1
CDX2Q99626 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDX2Q99626 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDX2Q99626 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDX2Q99626 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.94■■□□□ 1.1
CDX2Q99626 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDX2Q99626 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDX2Q99626 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDX2Q99626 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC21.93■■□□□ 1.1
CDX2Q99626 AL353807.1-201ENST00000427475 662 ntBASIC21.93■■□□□ 1.1
CDX2Q99626 KRT18P48-201ENST00000434763 852 ntBASIC21.93■■□□□ 1.1
CDX2Q99626 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CDX2Q99626 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC21.93■■□□□ 1.1
CDX2Q99626 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC21.93■■□□□ 1.1
CDX2Q99626 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
CDX2Q99626 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC21.93■■□□□ 1.1
CDX2Q99626 VPS72-207ENST00000640458 689 ntTSL 5 BASIC21.93■■□□□ 1.1
CDX2Q99626 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDX2Q99626 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDX2Q99626 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDX2Q99626 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.92■■□□□ 1.1
CDX2Q99626 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.92■■□□□ 1.1
CDX2Q99626 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CDX2Q99626 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CDX2Q99626 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDX2Q99626 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDX2Q99626 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC21.92■■□□□ 1.1
CDX2Q99626 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CDX2Q99626 AC007322.3-201ENST00000426526 701 ntBASIC21.92■■□□□ 1.1
CDX2Q99626 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC21.92■■□□□ 1.1
CDX2Q99626 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC21.92■■□□□ 1.1
CDX2Q99626 AC006011.2-201ENST00000621313 1158 ntBASIC21.92■■□□□ 1.1
CDX2Q99626 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC21.92■■□□□ 1.1
CDX2Q99626 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDX2Q99626 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.92■■□□□ 1.1
CDX2Q99626 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CDX2Q99626 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.91■■□□□ 1.1
CDX2Q99626 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDX2Q99626 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
CDX2Q99626 AC138932.3-201ENST00000567634 1902 ntBASIC21.91■■□□□ 1.1
CDX2Q99626 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDX2Q99626 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDX2Q99626 AL390955.1-201ENST00000428694 934 ntBASIC21.91■■□□□ 1.1
CDX2Q99626 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC21.91■■□□□ 1.1
CDX2Q99626 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC21.91■■□□□ 1.1
CDX2Q99626 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC21.91■■□□□ 1.1
CDX2Q99626 NUDT16P1-203ENST00000513809 620 ntBASIC21.91■■□□□ 1.1
CDX2Q99626 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC21.91■■□□□ 1.1
CDX2Q99626 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
CDX2Q99626 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC21.91■■□□□ 1.1
CDX2Q99626 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
CDX2Q99626 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDX2Q99626 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.91■■□□□ 1.1
CDX2Q99626 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDX2Q99626 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDX2Q99626 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.9■■□□□ 1.1
CDX2Q99626 GUK1-204ENST00000366721 689 ntTSL 3 BASIC21.9■■□□□ 1.1
CDX2Q99626 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDX2Q99626 CRYGFP-201ENST00000418459 633 ntBASIC21.9■■□□□ 1.1
CDX2Q99626 SERP1-205ENST00000487153 657 ntTSL 4 BASIC21.9■■□□□ 1.1
CDX2Q99626 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CDX2Q99626 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC21.9■■□□□ 1.1
CDX2Q99626 AC010203.1-204ENST00000548782 407 ntBASIC21.9■■□□□ 1.1
CDX2Q99626 AC073195.1-201ENST00000607241 877 ntBASIC21.9■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms