Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC17.21■□□□□ 0.35
GAFA1Q96PS6 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC17.21■□□□□ 0.35
GAFA1Q96PS6 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
GAFA1Q96PS6 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
GAFA1Q96PS6 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
GAFA1Q96PS6 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
GAFA1Q96PS6 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
GAFA1Q96PS6 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC17.21■□□□□ 0.35
GAFA1Q96PS6 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
GAFA1Q96PS6 AC007322.3-201ENST00000426526 701 ntBASIC17.21■□□□□ 0.35
GAFA1Q96PS6 CDCA4P2-201ENST00000441182 718 ntBASIC17.21■□□□□ 0.35
GAFA1Q96PS6 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC17.21■□□□□ 0.35
GAFA1Q96PS6 CDV3P1-201ENST00000471403 739 ntBASIC17.21■□□□□ 0.35
GAFA1Q96PS6 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
GAFA1Q96PS6 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC17.21■□□□□ 0.35
GAFA1Q96PS6 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
GAFA1Q96PS6 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
GAFA1Q96PS6 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
GAFA1Q96PS6 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
GAFA1Q96PS6 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC17.21■□□□□ 0.35
GAFA1Q96PS6 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GAFA1Q96PS6 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GAFA1Q96PS6 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
GAFA1Q96PS6 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
GAFA1Q96PS6 AC068338.2-201ENST00000563278 1430 ntBASIC17.21■□□□□ 0.34
GAFA1Q96PS6 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
GAFA1Q96PS6 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
GAFA1Q96PS6 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
GAFA1Q96PS6 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
GAFA1Q96PS6 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
GAFA1Q96PS6 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GAFA1Q96PS6 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
GAFA1Q96PS6 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC17.2■□□□□ 0.34
GAFA1Q96PS6 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GAFA1Q96PS6 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
GAFA1Q96PS6 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
GAFA1Q96PS6 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC17.2■□□□□ 0.34
GAFA1Q96PS6 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC17.2■□□□□ 0.34
GAFA1Q96PS6 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.2■□□□□ 0.34
GAFA1Q96PS6 PARP1-210ENST00000629232 477 ntTSL 5 BASIC17.2■□□□□ 0.34
GAFA1Q96PS6 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
GAFA1Q96PS6 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GAFA1Q96PS6 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
GAFA1Q96PS6 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.2■□□□□ 0.34
GAFA1Q96PS6 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GAFA1Q96PS6 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
GAFA1Q96PS6 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GAFA1Q96PS6 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
GAFA1Q96PS6 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
GAFA1Q96PS6 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
GAFA1Q96PS6 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC17.19■□□□□ 0.34
GAFA1Q96PS6 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
GAFA1Q96PS6 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GAFA1Q96PS6 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
GAFA1Q96PS6 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
GAFA1Q96PS6 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
GAFA1Q96PS6 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
GAFA1Q96PS6 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
GAFA1Q96PS6 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
GAFA1Q96PS6 AL162412.1-201ENST00000567129 965 ntBASIC17.19■□□□□ 0.34
GAFA1Q96PS6 RAP2CP1-201ENST00000605103 478 ntBASIC17.19■□□□□ 0.34
GAFA1Q96PS6 AC016405.3-201ENST00000607710 860 ntBASIC17.19■□□□□ 0.34
GAFA1Q96PS6 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC17.19■□□□□ 0.34
GAFA1Q96PS6 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
GAFA1Q96PS6 ERF-202ENST00000440177 2032 ntTSL 2 BASIC17.19■□□□□ 0.34
GAFA1Q96PS6 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GAFA1Q96PS6 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
GAFA1Q96PS6 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.19■□□□□ 0.34
GAFA1Q96PS6 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
GAFA1Q96PS6 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC17.18■□□□□ 0.34
GAFA1Q96PS6 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.18■□□□□ 0.34
GAFA1Q96PS6 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
GAFA1Q96PS6 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC17.18■□□□□ 0.34
GAFA1Q96PS6 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
GAFA1Q96PS6 AC006128.1-201ENST00000624704 1661 ntBASIC17.18■□□□□ 0.34
GAFA1Q96PS6 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
GAFA1Q96PS6 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.18■□□□□ 0.34
GAFA1Q96PS6 APTR-203ENST00000430801 583 ntTSL 5 BASIC17.18■□□□□ 0.34
GAFA1Q96PS6 CYP2T1P-201ENST00000432607 1285 ntBASIC17.18■□□□□ 0.34
GAFA1Q96PS6 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC17.18■□□□□ 0.34
GAFA1Q96PS6 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC17.18■□□□□ 0.34
GAFA1Q96PS6 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC17.18■□□□□ 0.34
GAFA1Q96PS6 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
GAFA1Q96PS6 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
GAFA1Q96PS6 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
GAFA1Q96PS6 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC17.18■□□□□ 0.34
GAFA1Q96PS6 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.18■□□□□ 0.34
GAFA1Q96PS6 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC17.18■□□□□ 0.34
GAFA1Q96PS6 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
GAFA1Q96PS6 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GAFA1Q96PS6 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC17.17■□□□□ 0.34
GAFA1Q96PS6 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
GAFA1Q96PS6 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
GAFA1Q96PS6 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GAFA1Q96PS6 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
GAFA1Q96PS6 AC026185.1-201ENST00000445748 174 ntBASIC17.17■□□□□ 0.34
GAFA1Q96PS6 PBX1-209ENST00000485769 834 ntTSL 2 BASIC17.17■□□□□ 0.34
GAFA1Q96PS6 CASP6-205ENST00000505486 538 ntTSL 4 BASIC17.17■□□□□ 0.34
GAFA1Q96PS6 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
GAFA1Q96PS6 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms