Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.28■□□□□ 0.68
MS4A4EQ96PG1 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
MS4A4EQ96PG1 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
MS4A4EQ96PG1 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MS4A4EQ96PG1 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MS4A4EQ96PG1 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
MS4A4EQ96PG1 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
MS4A4EQ96PG1 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MS4A4EQ96PG1 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.28■□□□□ 0.68
MS4A4EQ96PG1 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
MS4A4EQ96PG1 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
MS4A4EQ96PG1 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MS4A4EQ96PG1 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MS4A4EQ96PG1 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.28■□□□□ 0.68
MS4A4EQ96PG1 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.28■□□□□ 0.68
MS4A4EQ96PG1 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.28■□□□□ 0.68
MS4A4EQ96PG1 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.27■□□□□ 0.68
MS4A4EQ96PG1 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
MS4A4EQ96PG1 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.27■□□□□ 0.68
MS4A4EQ96PG1 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
MS4A4EQ96PG1 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MS4A4EQ96PG1 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
MS4A4EQ96PG1 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
MS4A4EQ96PG1 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.27■□□□□ 0.68
MS4A4EQ96PG1 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.27■□□□□ 0.68
MS4A4EQ96PG1 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
MS4A4EQ96PG1 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
MS4A4EQ96PG1 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.27■□□□□ 0.68
MS4A4EQ96PG1 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
MS4A4EQ96PG1 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
MS4A4EQ96PG1 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
MS4A4EQ96PG1 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.27■□□□□ 0.68
MS4A4EQ96PG1 UBE2DNL-204ENST00000602536 740 ntBASIC19.27■□□□□ 0.68
MS4A4EQ96PG1 AC243732.1-201ENST00000612648 864 ntBASIC19.27■□□□□ 0.68
MS4A4EQ96PG1 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.27■□□□□ 0.68
MS4A4EQ96PG1 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MS4A4EQ96PG1 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
MS4A4EQ96PG1 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
MS4A4EQ96PG1 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.27■□□□□ 0.67
MS4A4EQ96PG1 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
MS4A4EQ96PG1 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MS4A4EQ96PG1 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MS4A4EQ96PG1 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
MS4A4EQ96PG1 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.26■□□□□ 0.67
MS4A4EQ96PG1 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
MS4A4EQ96PG1 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
MS4A4EQ96PG1 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
MS4A4EQ96PG1 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MS4A4EQ96PG1 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
MS4A4EQ96PG1 RARRES2P6-201ENST00000567333 442 ntBASIC19.26■□□□□ 0.67
MS4A4EQ96PG1 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.26■□□□□ 0.67
MS4A4EQ96PG1 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.26■□□□□ 0.67
MS4A4EQ96PG1 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.26■□□□□ 0.67
MS4A4EQ96PG1 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
MS4A4EQ96PG1 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.26■□□□□ 0.67
MS4A4EQ96PG1 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.26■□□□□ 0.67
MS4A4EQ96PG1 RBM17P2-201ENST00000616397 1405 ntBASIC19.25■□□□□ 0.67
MS4A4EQ96PG1 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MS4A4EQ96PG1 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MS4A4EQ96PG1 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MS4A4EQ96PG1 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MS4A4EQ96PG1 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
MS4A4EQ96PG1 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
MS4A4EQ96PG1 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.25■□□□□ 0.67
MS4A4EQ96PG1 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MS4A4EQ96PG1 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.25■□□□□ 0.67
MS4A4EQ96PG1 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.25■□□□□ 0.67
MS4A4EQ96PG1 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.25■□□□□ 0.67
MS4A4EQ96PG1 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.25■□□□□ 0.67
MS4A4EQ96PG1 MYCNOS-205ENST00000641950 531 ntBASIC19.25■□□□□ 0.67
MS4A4EQ96PG1 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MS4A4EQ96PG1 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
MS4A4EQ96PG1 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.25■□□□□ 0.67
MS4A4EQ96PG1 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.25■□□□□ 0.67
MS4A4EQ96PG1 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.25■□□□□ 0.67
MS4A4EQ96PG1 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MS4A4EQ96PG1 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
MS4A4EQ96PG1 AC116050.2-201ENST00000612102 1779 ntBASIC19.24■□□□□ 0.67
MS4A4EQ96PG1 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MS4A4EQ96PG1 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MS4A4EQ96PG1 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MS4A4EQ96PG1 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.24■□□□□ 0.67
MS4A4EQ96PG1 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.24■□□□□ 0.67
MS4A4EQ96PG1 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MS4A4EQ96PG1 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MS4A4EQ96PG1 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.24■□□□□ 0.67
MS4A4EQ96PG1 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.24■□□□□ 0.67
MS4A4EQ96PG1 AC026271.2-201ENST00000428091 497 ntBASIC19.24■□□□□ 0.67
MS4A4EQ96PG1 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
MS4A4EQ96PG1 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.24■□□□□ 0.67
MS4A4EQ96PG1 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.24■□□□□ 0.67
MS4A4EQ96PG1 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.24■□□□□ 0.67
MS4A4EQ96PG1 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.24■□□□□ 0.67
MS4A4EQ96PG1 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.24■□□□□ 0.67
MS4A4EQ96PG1 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.24■□□□□ 0.67
MS4A4EQ96PG1 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MS4A4EQ96PG1 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
MS4A4EQ96PG1 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
MS4A4EQ96PG1 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MS4A4EQ96PG1 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms