Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
LRRC58Q96CX6 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.65■□□□□ 0.74
LRRC58Q96CX6 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRRC58Q96CX6 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRRC58Q96CX6 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
LRRC58Q96CX6 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
LRRC58Q96CX6 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
LRRC58Q96CX6 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
LRRC58Q96CX6 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
LRRC58Q96CX6 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
LRRC58Q96CX6 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.64■□□□□ 0.73
LRRC58Q96CX6 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRRC58Q96CX6 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.64■□□□□ 0.73
LRRC58Q96CX6 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.64■□□□□ 0.73
LRRC58Q96CX6 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.64■□□□□ 0.73
LRRC58Q96CX6 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.64■□□□□ 0.73
LRRC58Q96CX6 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LRRC58Q96CX6 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.64■□□□□ 0.73
LRRC58Q96CX6 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.64■□□□□ 0.73
LRRC58Q96CX6 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
LRRC58Q96CX6 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
LRRC58Q96CX6 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
LRRC58Q96CX6 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRRC58Q96CX6 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
LRRC58Q96CX6 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRRC58Q96CX6 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRRC58Q96CX6 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.64■□□□□ 0.73
LRRC58Q96CX6 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRRC58Q96CX6 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.64■□□□□ 0.73
LRRC58Q96CX6 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRRC58Q96CX6 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LRRC58Q96CX6 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LRRC58Q96CX6 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LRRC58Q96CX6 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.63■□□□□ 0.73
LRRC58Q96CX6 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.63■□□□□ 0.73
LRRC58Q96CX6 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LRRC58Q96CX6 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.63■□□□□ 0.73
LRRC58Q96CX6 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
LRRC58Q96CX6 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LRRC58Q96CX6 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
LRRC58Q96CX6 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRRC58Q96CX6 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRRC58Q96CX6 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRRC58Q96CX6 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRRC58Q96CX6 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
LRRC58Q96CX6 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRRC58Q96CX6 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRRC58Q96CX6 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LRRC58Q96CX6 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRRC58Q96CX6 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.62■□□□□ 0.73
LRRC58Q96CX6 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
LRRC58Q96CX6 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.62■□□□□ 0.73
LRRC58Q96CX6 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.62■□□□□ 0.73
LRRC58Q96CX6 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.62■□□□□ 0.73
LRRC58Q96CX6 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRRC58Q96CX6 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.62■□□□□ 0.73
LRRC58Q96CX6 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRRC58Q96CX6 AC005224.4-201ENST00000583262 1652 ntBASIC19.62■□□□□ 0.73
LRRC58Q96CX6 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRRC58Q96CX6 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
LRRC58Q96CX6 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRRC58Q96CX6 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LRRC58Q96CX6 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.61■□□□□ 0.73
LRRC58Q96CX6 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRRC58Q96CX6 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRRC58Q96CX6 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
LRRC58Q96CX6 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.61■□□□□ 0.73
LRRC58Q96CX6 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.61■□□□□ 0.73
LRRC58Q96CX6 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LRRC58Q96CX6 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRRC58Q96CX6 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRRC58Q96CX6 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.61■□□□□ 0.73
LRRC58Q96CX6 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
LRRC58Q96CX6 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRRC58Q96CX6 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC58Q96CX6 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC58Q96CX6 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC58Q96CX6 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.6■□□□□ 0.73
LRRC58Q96CX6 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC58Q96CX6 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.6■□□□□ 0.73
LRRC58Q96CX6 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC58Q96CX6 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.6■□□□□ 0.73
LRRC58Q96CX6 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC58Q96CX6 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
LRRC58Q96CX6 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.6■□□□□ 0.73
LRRC58Q96CX6 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.6■□□□□ 0.73
LRRC58Q96CX6 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC58Q96CX6 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
LRRC58Q96CX6 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
LRRC58Q96CX6 RNF165-205ENST00000588679 2904 ntBASIC19.6■□□□□ 0.73
LRRC58Q96CX6 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC58Q96CX6 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
LRRC58Q96CX6 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC58Q96CX6 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRRC58Q96CX6 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRRC58Q96CX6 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
LRRC58Q96CX6 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRRC58Q96CX6 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRRC58Q96CX6 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LRRC58Q96CX6 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms