Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VPS33AQ96AX1 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
VPS33AQ96AX1 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
VPS33AQ96AX1 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.83■□□□□ 0.77
VPS33AQ96AX1 AC112907.3-201ENST00000577781 2400 ntBASIC19.83■□□□□ 0.77
VPS33AQ96AX1 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.83■□□□□ 0.77
VPS33AQ96AX1 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
VPS33AQ96AX1 AC024257.2-201ENST00000549699 147 ntBASIC19.83■□□□□ 0.77
VPS33AQ96AX1 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
VPS33AQ96AX1 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.83■□□□□ 0.77
VPS33AQ96AX1 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.83■□□□□ 0.76
VPS33AQ96AX1 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
VPS33AQ96AX1 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
VPS33AQ96AX1 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.83■□□□□ 0.76
VPS33AQ96AX1 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.83■□□□□ 0.76
VPS33AQ96AX1 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
VPS33AQ96AX1 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
VPS33AQ96AX1 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.82■□□□□ 0.76
VPS33AQ96AX1 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VPS33AQ96AX1 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
VPS33AQ96AX1 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VPS33AQ96AX1 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.82■□□□□ 0.76
VPS33AQ96AX1 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VPS33AQ96AX1 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
VPS33AQ96AX1 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
VPS33AQ96AX1 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
VPS33AQ96AX1 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VPS33AQ96AX1 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.82■□□□□ 0.76
VPS33AQ96AX1 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VPS33AQ96AX1 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.82■□□□□ 0.76
VPS33AQ96AX1 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
VPS33AQ96AX1 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
VPS33AQ96AX1 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
VPS33AQ96AX1 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.82■□□□□ 0.76
VPS33AQ96AX1 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
VPS33AQ96AX1 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.82■□□□□ 0.76
VPS33AQ96AX1 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.82■□□□□ 0.76
VPS33AQ96AX1 FP700111.2-201ENST00000619190 1892 ntBASIC19.82■□□□□ 0.76
VPS33AQ96AX1 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
VPS33AQ96AX1 AC005224.4-201ENST00000583262 1652 ntBASIC19.81■□□□□ 0.76
VPS33AQ96AX1 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.81■□□□□ 0.76
VPS33AQ96AX1 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
VPS33AQ96AX1 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
VPS33AQ96AX1 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
VPS33AQ96AX1 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VPS33AQ96AX1 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
VPS33AQ96AX1 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VPS33AQ96AX1 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
VPS33AQ96AX1 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
VPS33AQ96AX1 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.81■□□□□ 0.76
VPS33AQ96AX1 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
VPS33AQ96AX1 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.81■□□□□ 0.76
VPS33AQ96AX1 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.81■□□□□ 0.76
VPS33AQ96AX1 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
VPS33AQ96AX1 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.81■□□□□ 0.76
VPS33AQ96AX1 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.81■□□□□ 0.76
VPS33AQ96AX1 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
VPS33AQ96AX1 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.81■□□□□ 0.76
VPS33AQ96AX1 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VPS33AQ96AX1 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.81■□□□□ 0.76
VPS33AQ96AX1 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VPS33AQ96AX1 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
VPS33AQ96AX1 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
VPS33AQ96AX1 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VPS33AQ96AX1 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VPS33AQ96AX1 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VPS33AQ96AX1 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VPS33AQ96AX1 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
VPS33AQ96AX1 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
VPS33AQ96AX1 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.8■□□□□ 0.76
VPS33AQ96AX1 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.8■□□□□ 0.76
VPS33AQ96AX1 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.8■□□□□ 0.76
VPS33AQ96AX1 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VPS33AQ96AX1 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VPS33AQ96AX1 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
VPS33AQ96AX1 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
VPS33AQ96AX1 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
VPS33AQ96AX1 AL136162.1-201ENST00000607711 1078 ntBASIC19.8■□□□□ 0.76
VPS33AQ96AX1 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VPS33AQ96AX1 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
VPS33AQ96AX1 BX005040.4-201ENST00000637145 1518 ntBASIC19.8■□□□□ 0.76
VPS33AQ96AX1 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
VPS33AQ96AX1 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.8■□□□□ 0.76
VPS33AQ96AX1 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VPS33AQ96AX1 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.79■□□□□ 0.76
VPS33AQ96AX1 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VPS33AQ96AX1 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.79■□□□□ 0.76
VPS33AQ96AX1 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.79■□□□□ 0.76
VPS33AQ96AX1 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
VPS33AQ96AX1 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VPS33AQ96AX1 AC008764.7-201ENST00000593779 1081 ntBASIC19.79■□□□□ 0.76
VPS33AQ96AX1 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
VPS33AQ96AX1 AC105233.4-201ENST00000642045 216 ntBASIC19.79■□□□□ 0.76
VPS33AQ96AX1 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VPS33AQ96AX1 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VPS33AQ96AX1 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
VPS33AQ96AX1 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
VPS33AQ96AX1 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
VPS33AQ96AX1 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
VPS33AQ96AX1 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms