Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
SYNE2Q8WXH0 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC8.54□□□□□ -1.04
SYNE2Q8WXH0 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
SYNE2Q8WXH0 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
SYNE2Q8WXH0 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
SYNE2Q8WXH0 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC8.53□□□□□ -1.04
SYNE2Q8WXH0 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC8.53□□□□□ -1.04
SYNE2Q8WXH0 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC8.53□□□□□ -1.04
SYNE2Q8WXH0 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
SYNE2Q8WXH0 OR7E47P-201ENST00000546390 1422 ntBASIC8.53□□□□□ -1.04
SYNE2Q8WXH0 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC8.53□□□□□ -1.04
SYNE2Q8WXH0 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
SYNE2Q8WXH0 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
SYNE2Q8WXH0 AC092803.2-201ENST00000564287 1899 ntBASIC8.53□□□□□ -1.04
SYNE2Q8WXH0 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC8.53□□□□□ -1.04
SYNE2Q8WXH0 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
SYNE2Q8WXH0 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
SYNE2Q8WXH0 ALDH1A3-203ENST00000557963 1670 ntBASIC8.53□□□□□ -1.04
SYNE2Q8WXH0 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
SYNE2Q8WXH0 PRR31-201ENST00000371629 978 ntTSL 2 BASIC8.53□□□□□ -1.04
SYNE2Q8WXH0 CD44-222ENST00000526025 1052 ntTSL 2 BASIC8.53□□□□□ -1.04
SYNE2Q8WXH0 SLC25A1P4-201ENST00000567977 778 ntBASIC8.53□□□□□ -1.04
SYNE2Q8WXH0 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC8.53□□□□□ -1.04
SYNE2Q8WXH0 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
SYNE2Q8WXH0 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC8.53□□□□□ -1.04
SYNE2Q8WXH0 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC8.53□□□□□ -1.04
SYNE2Q8WXH0 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
SYNE2Q8WXH0 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
SYNE2Q8WXH0 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
SYNE2Q8WXH0 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC8.53□□□□□ -1.04
SYNE2Q8WXH0 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
SYNE2Q8WXH0 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
SYNE2Q8WXH0 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC8.53□□□□□ -1.04
SYNE2Q8WXH0 AC104692.2-201ENST00000603054 253 ntBASIC8.53□□□□□ -1.04
SYNE2Q8WXH0 AC120498.8-201ENST00000614275 531 ntBASIC8.53□□□□□ -1.04
SYNE2Q8WXH0 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
SYNE2Q8WXH0 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC8.53□□□□□ -1.04
SYNE2Q8WXH0 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC8.53□□□□□ -1.04
SYNE2Q8WXH0 ABR-217ENST00000572441 563 ntTSL 4 BASIC8.53□□□□□ -1.04
SYNE2Q8WXH0 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC8.53□□□□□ -1.04
SYNE2Q8WXH0 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
SYNE2Q8WXH0 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC8.52□□□□□ -1.04
SYNE2Q8WXH0 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC8.52□□□□□ -1.04
SYNE2Q8WXH0 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC8.52□□□□□ -1.05
SYNE2Q8WXH0 AC005104.2-201ENST00000427818 678 ntBASIC8.52□□□□□ -1.05
SYNE2Q8WXH0 HLA-V-201ENST00000429037 534 ntBASIC8.52□□□□□ -1.05
SYNE2Q8WXH0 HTR5BP-201ENST00000430851 1154 ntBASIC8.52□□□□□ -1.05
SYNE2Q8WXH0 AC079776.4-201ENST00000511039 504 ntBASIC8.52□□□□□ -1.05
SYNE2Q8WXH0 SLC25A1P1-201ENST00000528351 927 ntBASIC8.52□□□□□ -1.05
SYNE2Q8WXH0 AL138966.2-201ENST00000621997 464 ntBASIC8.52□□□□□ -1.05
SYNE2Q8WXH0 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.05
SYNE2Q8WXH0 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
SYNE2Q8WXH0 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC8.52□□□□□ -1.05
SYNE2Q8WXH0 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
SYNE2Q8WXH0 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
SYNE2Q8WXH0 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC8.52□□□□□ -1.05
SYNE2Q8WXH0 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC8.52□□□□□ -1.05
SYNE2Q8WXH0 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC8.52□□□□□ -1.05
SYNE2Q8WXH0 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC8.52□□□□□ -1.05
SYNE2Q8WXH0 NME4-212ENST00000621774 904 ntTSL 3 BASIC8.52□□□□□ -1.05
SYNE2Q8WXH0 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC8.52□□□□□ -1.05
SYNE2Q8WXH0 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC8.52□□□□□ -1.05
SYNE2Q8WXH0 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC8.52□□□□□ -1.05
SYNE2Q8WXH0 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
SYNE2Q8WXH0 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC8.52□□□□□ -1.05
SYNE2Q8WXH0 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC8.52□□□□□ -1.05
SYNE2Q8WXH0 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
SYNE2Q8WXH0 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
SYNE2Q8WXH0 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC8.52□□□□□ -1.05
SYNE2Q8WXH0 AC135731.1-201ENST00000569415 2548 ntBASIC8.52□□□□□ -1.05
SYNE2Q8WXH0 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
SYNE2Q8WXH0 TSPY19P-201ENST00000418461 509 ntBASIC8.52□□□□□ -1.05
SYNE2Q8WXH0 TSPY18P-201ENST00000441642 509 ntBASIC8.52□□□□□ -1.05
SYNE2Q8WXH0 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
SYNE2Q8WXH0 AL591742.1-201ENST00000604433 565 ntBASIC8.52□□□□□ -1.05
SYNE2Q8WXH0 AL121956.5-201ENST00000625261 221 ntBASIC8.52□□□□□ -1.05
SYNE2Q8WXH0 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
SYNE2Q8WXH0 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
SYNE2Q8WXH0 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
SYNE2Q8WXH0 MIR574-201ENST00000385209 96 ntBASIC8.51□□□□□ -1.05
SYNE2Q8WXH0 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
SYNE2Q8WXH0 AC120114.3-201ENST00000611923 658 ntBASIC8.51□□□□□ -1.05
SYNE2Q8WXH0 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC8.51□□□□□ -1.05
SYNE2Q8WXH0 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
SYNE2Q8WXH0 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
SYNE2Q8WXH0 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
SYNE2Q8WXH0 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC8.51□□□□□ -1.05
SYNE2Q8WXH0 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC8.51□□□□□ -1.05
SYNE2Q8WXH0 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
SYNE2Q8WXH0 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC8.51□□□□□ -1.05
SYNE2Q8WXH0 FAM87A-204ENST00000613235 858 ntBASIC8.51□□□□□ -1.05
SYNE2Q8WXH0 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
SYNE2Q8WXH0 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC8.51□□□□□ -1.05
SYNE2Q8WXH0 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
SYNE2Q8WXH0 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
SYNE2Q8WXH0 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
SYNE2Q8WXH0 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
SYNE2Q8WXH0 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC8.51□□□□□ -1.05
SYNE2Q8WXH0 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC8.51□□□□□ -1.05
SYNE2Q8WXH0 SLC6A10P-202ENST00000431994 2058 ntBASIC8.51□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms