Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.56■□□□□ 0.88
RAB3IL1Q8TBN0 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RAB3IL1Q8TBN0 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.56■□□□□ 0.88
RAB3IL1Q8TBN0 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.56■□□□□ 0.88
RAB3IL1Q8TBN0 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
RAB3IL1Q8TBN0 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RAB3IL1Q8TBN0 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.56■□□□□ 0.88
RAB3IL1Q8TBN0 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RAB3IL1Q8TBN0 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RAB3IL1Q8TBN0 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RAB3IL1Q8TBN0 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RAB3IL1Q8TBN0 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.56■□□□□ 0.88
RAB3IL1Q8TBN0 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
RAB3IL1Q8TBN0 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RAB3IL1Q8TBN0 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RAB3IL1Q8TBN0 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
RAB3IL1Q8TBN0 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.55■□□□□ 0.88
RAB3IL1Q8TBN0 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAB3IL1Q8TBN0 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.55■□□□□ 0.88
RAB3IL1Q8TBN0 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAB3IL1Q8TBN0 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC20.55■□□□□ 0.88
RAB3IL1Q8TBN0 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAB3IL1Q8TBN0 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAB3IL1Q8TBN0 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
RAB3IL1Q8TBN0 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.55■□□□□ 0.88
RAB3IL1Q8TBN0 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.55■□□□□ 0.88
RAB3IL1Q8TBN0 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RAB3IL1Q8TBN0 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAB3IL1Q8TBN0 AL138724.1-201ENST00000606771 1088 ntBASIC20.55■□□□□ 0.88
RAB3IL1Q8TBN0 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.55■□□□□ 0.88
RAB3IL1Q8TBN0 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.55■□□□□ 0.88
RAB3IL1Q8TBN0 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAB3IL1Q8TBN0 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RAB3IL1Q8TBN0 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAB3IL1Q8TBN0 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAB3IL1Q8TBN0 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
RAB3IL1Q8TBN0 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAB3IL1Q8TBN0 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RAB3IL1Q8TBN0 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
RAB3IL1Q8TBN0 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.54■□□□□ 0.88
RAB3IL1Q8TBN0 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.54■□□□□ 0.88
RAB3IL1Q8TBN0 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RAB3IL1Q8TBN0 AL356740.2-201ENST00000601559 647 ntBASIC20.54■□□□□ 0.88
RAB3IL1Q8TBN0 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAB3IL1Q8TBN0 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RAB3IL1Q8TBN0 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAB3IL1Q8TBN0 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.54■□□□□ 0.88
RAB3IL1Q8TBN0 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAB3IL1Q8TBN0 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.54■□□□□ 0.88
RAB3IL1Q8TBN0 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.54■□□□□ 0.88
RAB3IL1Q8TBN0 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RAB3IL1Q8TBN0 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAB3IL1Q8TBN0 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAB3IL1Q8TBN0 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAB3IL1Q8TBN0 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
RAB3IL1Q8TBN0 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.53■□□□□ 0.88
RAB3IL1Q8TBN0 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.53■□□□□ 0.88
RAB3IL1Q8TBN0 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RAB3IL1Q8TBN0 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
RAB3IL1Q8TBN0 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAB3IL1Q8TBN0 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.53■□□□□ 0.88
RAB3IL1Q8TBN0 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.53■□□□□ 0.88
RAB3IL1Q8TBN0 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAB3IL1Q8TBN0 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
RAB3IL1Q8TBN0 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RAB3IL1Q8TBN0 SRD5A1P1-201ENST00000442297 786 ntBASIC20.53■□□□□ 0.88
RAB3IL1Q8TBN0 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.53■□□□□ 0.88
RAB3IL1Q8TBN0 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.53■□□□□ 0.88
RAB3IL1Q8TBN0 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.53■□□□□ 0.88
RAB3IL1Q8TBN0 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAB3IL1Q8TBN0 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAB3IL1Q8TBN0 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
RAB3IL1Q8TBN0 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RAB3IL1Q8TBN0 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RAB3IL1Q8TBN0 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RAB3IL1Q8TBN0 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RAB3IL1Q8TBN0 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
RAB3IL1Q8TBN0 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RAB3IL1Q8TBN0 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RAB3IL1Q8TBN0 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RAB3IL1Q8TBN0 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
RAB3IL1Q8TBN0 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RAB3IL1Q8TBN0 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.52■□□□□ 0.88
RAB3IL1Q8TBN0 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RAB3IL1Q8TBN0 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.52■□□□□ 0.88
RAB3IL1Q8TBN0 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.52■□□□□ 0.88
RAB3IL1Q8TBN0 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RAB3IL1Q8TBN0 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
RAB3IL1Q8TBN0 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RAB3IL1Q8TBN0 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
RAB3IL1Q8TBN0 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
RAB3IL1Q8TBN0 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.52■□□□□ 0.87
RAB3IL1Q8TBN0 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.51■□□□□ 0.87
RAB3IL1Q8TBN0 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RAB3IL1Q8TBN0 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
RAB3IL1Q8TBN0 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RAB3IL1Q8TBN0 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
RAB3IL1Q8TBN0 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RAB3IL1Q8TBN0 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.51■□□□□ 0.87
RAB3IL1Q8TBN0 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms