Protein–RNA interactions for Protein: Q8NFJ9

BBS1, Bardet-Biedl syndrome 1 protein, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1Q8NFJ9 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.58■□□□□ 0.56
BBS1Q8NFJ9 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.58■□□□□ 0.56
BBS1Q8NFJ9 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.58■□□□□ 0.56
BBS1Q8NFJ9 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
BBS1Q8NFJ9 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
BBS1Q8NFJ9 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
BBS1Q8NFJ9 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
BBS1Q8NFJ9 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
BBS1Q8NFJ9 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
BBS1Q8NFJ9 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.58■□□□□ 0.56
BBS1Q8NFJ9 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.58■□□□□ 0.56
BBS1Q8NFJ9 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.57■□□□□ 0.56
BBS1Q8NFJ9 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
BBS1Q8NFJ9 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.57■□□□□ 0.56
BBS1Q8NFJ9 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
BBS1Q8NFJ9 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
BBS1Q8NFJ9 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
BBS1Q8NFJ9 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
BBS1Q8NFJ9 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
BBS1Q8NFJ9 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
BBS1Q8NFJ9 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.57■□□□□ 0.56
BBS1Q8NFJ9 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
BBS1Q8NFJ9 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
BBS1Q8NFJ9 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.57■□□□□ 0.56
BBS1Q8NFJ9 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC18.57■□□□□ 0.56
BBS1Q8NFJ9 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.57■□□□□ 0.56
BBS1Q8NFJ9 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
BBS1Q8NFJ9 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.57■□□□□ 0.56
BBS1Q8NFJ9 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC18.57■□□□□ 0.56
BBS1Q8NFJ9 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.57■□□□□ 0.56
BBS1Q8NFJ9 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
BBS1Q8NFJ9 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.57■□□□□ 0.56
BBS1Q8NFJ9 AL162377.1-201ENST00000618844 1793 ntBASIC18.57■□□□□ 0.56
BBS1Q8NFJ9 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
BBS1Q8NFJ9 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.57■□□□□ 0.56
BBS1Q8NFJ9 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.57■□□□□ 0.56
BBS1Q8NFJ9 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
BBS1Q8NFJ9 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.57■□□□□ 0.56
BBS1Q8NFJ9 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
BBS1Q8NFJ9 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
BBS1Q8NFJ9 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
BBS1Q8NFJ9 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
BBS1Q8NFJ9 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
BBS1Q8NFJ9 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
BBS1Q8NFJ9 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.56■□□□□ 0.56
BBS1Q8NFJ9 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
BBS1Q8NFJ9 TSPY26P-201ENST00000476365 1326 ntBASIC18.56■□□□□ 0.56
BBS1Q8NFJ9 AC135279.3-201ENST00000610945 1311 ntBASIC18.56■□□□□ 0.56
BBS1Q8NFJ9 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.56■□□□□ 0.56
BBS1Q8NFJ9 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.56■□□□□ 0.56
BBS1Q8NFJ9 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
BBS1Q8NFJ9 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
BBS1Q8NFJ9 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
BBS1Q8NFJ9 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
BBS1Q8NFJ9 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.56■□□□□ 0.56
BBS1Q8NFJ9 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
BBS1Q8NFJ9 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
BBS1Q8NFJ9 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.56■□□□□ 0.56
BBS1Q8NFJ9 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.56■□□□□ 0.56
BBS1Q8NFJ9 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC18.56■□□□□ 0.56
BBS1Q8NFJ9 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
BBS1Q8NFJ9 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
BBS1Q8NFJ9 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
BBS1Q8NFJ9 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18.56■□□□□ 0.56
BBS1Q8NFJ9 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.56■□□□□ 0.56
BBS1Q8NFJ9 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.56■□□□□ 0.56
BBS1Q8NFJ9 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.56■□□□□ 0.56
BBS1Q8NFJ9 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
BBS1Q8NFJ9 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
BBS1Q8NFJ9 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
BBS1Q8NFJ9 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
BBS1Q8NFJ9 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
BBS1Q8NFJ9 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
BBS1Q8NFJ9 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
BBS1Q8NFJ9 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.55■□□□□ 0.56
BBS1Q8NFJ9 AC099791.1-201ENST00000416440 715 ntBASIC18.55■□□□□ 0.56
BBS1Q8NFJ9 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
BBS1Q8NFJ9 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC18.55■□□□□ 0.56
BBS1Q8NFJ9 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
BBS1Q8NFJ9 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC18.55■□□□□ 0.56
BBS1Q8NFJ9 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
BBS1Q8NFJ9 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
BBS1Q8NFJ9 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
BBS1Q8NFJ9 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
BBS1Q8NFJ9 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
BBS1Q8NFJ9 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
BBS1Q8NFJ9 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
BBS1Q8NFJ9 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
BBS1Q8NFJ9 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
BBS1Q8NFJ9 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
BBS1Q8NFJ9 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.54■□□□□ 0.56
BBS1Q8NFJ9 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
BBS1Q8NFJ9 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
BBS1Q8NFJ9 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC18.54■□□□□ 0.56
BBS1Q8NFJ9 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
BBS1Q8NFJ9 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.54■□□□□ 0.56
BBS1Q8NFJ9 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.54■□□□□ 0.56
BBS1Q8NFJ9 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
BBS1Q8NFJ9 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.54■□□□□ 0.56
BBS1Q8NFJ9 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms